Factsheet for TraesCS4A01G039600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, secretory
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G265800.1	Wheat	unclear	88.89	84.38
TraesCS4B01G265900.1	Wheat	vacuole	87.61	83.16
HORVU6Hr1G042330.1	Barley	cytosol	60.9	76.2
TraesCS5A01G549600.1	Wheat	plastid	79.27	74.95
Zm00001d024281_P001	Maize	extracellular	75.43	70.6
HORVU4Hr1G071450.1	Barley	mitochondrion	84.83	69.89
Os09t0368500-01	Rice	golgi	69.44	68.57
Os09t0368200-00	Rice	golgi, vacuole	72.22	68.15
Os03t0193400-00	Rice	nucleus, peroxisome	27.35	63.37
TraesCS7A01G378800.1	Wheat	cytosol	60.9	62.36
OQU80059	Sorghum	peroxisome	74.15	61.96
TraesCS7A01G539200.1	Wheat	plasma membrane, vacuole	65.17	60.04
VIT_01s0127g00770.t01	Wine grape	cytosol	11.54	59.34
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	32.48	55.88
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	56.84	53.74
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	54.27	50.3
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	50.43	48.26
KRH39911	Soybean	plasma membrane	40.6	40.86
AT5G13700.1	Thale cress	extracellular	39.1	38.77
KRH13982	Soybean	plasma membrane	41.03	38.32
CDX70516	Canola	extracellular	38.46	38.22
Bra006210.1-P	Field mustard	extracellular	38.25	38.0
KRH32977	Soybean	plasma membrane	40.6	38.0
CDX78534	Canola	extracellular	38.46	37.5
Solyc01g087590.2.1	Tomato	vacuole	39.74	37.42
PGSC0003DMT400017667	Potato	vacuole	39.32	37.17
KRH69303	Soybean	vacuole	30.13	36.62
TraesCS2A01G548200.1	Wheat	plastid	23.08	22.04
TraesCS2A01G467300.1	Wheat	peroxisome	22.22	21.49
TraesCS2A01G548100.1	Wheat	peroxisome	21.58	20.74
TraesCS3A01G250700.1	Wheat	mitochondrion	20.94	19.22
TraesCS7A01G306400.1	Wheat	cytosol, nucleus, plasma membrane, plastid	23.72	14.62
TraesCS6A01G318300.1	Wheat	nucleus	24.79	14.11
TraesCS2A01G407400.1	Wheat	cytosol	23.72	13.25
TraesCS6A01G405500.2	Wheat	nucleus	23.72	5.99

Protein Annotations

EnsemblPlants:TraesCS4A01G039600.1	EnsemblPlantsGene:TraesCS4A01G039600	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	InterPro:IPR036188	PANTHER:PTHR10742	PANTHER:PTHR10742:SF313	PFAM:PF01593	PRINTS:PR00757
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51905	SUPFAM:SSF54373	MapMan:8.5.2.1	:

Description

No Description!

Coordinates

chr4A:+:32116375..32119457

Molecular Weight (calculated)

52557.6 Da

IEP (calculated)

9.623

GRAVY (calculated)

-0.398

Length

468 amino acids

Sequence
(BLAST)

001: MTPTIATALV LALTLAHHAS LASAAGHRVI IVGAGMSGIS AGKRLSEAGI TDLLILEATD HVGGRMRKRN FGGVNVEMGA NWVEGVNGGK MNPIWPLVNS
101: TLKLRNFRSD FDGLAENVYK ERGGVYDRAY VQKRLHRSNE VEEGGAKLSA KLRPSGQDDM SILTMQRLNN HLPNGPASPV DMILDYFKHD YEFAEPPRVT
201: SLQNVVPLAT FRDYVYFVAD RRGYEAIVHH LAGQYLEADK SGNIVVREIS HSGSGVAVKT EDDKVYKADY VMVSTSVGVL QSDLIQFKPR LPAWKILSIY
301: QFDMAVYTKI FVKFPRKFWP EGKGREFFLY ASSRRGYYGV WRRQRSPGDR HRRGVEADRA AARQPDQGGD RGVLGEDVPD ATDILVPRWW SDRFYRGTFS
401: NWPIGVNRYE YDQLRAPVGR VYFSGEHTSE HYNGYVHGAY LSGIDSADIL IKCAHKRMCK HHIPGKFE

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.