Factsheet for TraesCS2A01G407400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	13.01	99.09
TraesCS2B01G425100.1	Wheat	plastid	95.11	98.76
TraesCS2D01G404400.1	Wheat	plastid	98.45	98.57
HORVU2Hr1G096300.1	Barley	plastid	49.52	91.21
Os04t0560300-01	Rice	cytosol	83.05	85.82
EES12649	Sorghum	plastid	81.74	84.78
Zm00001d002684_P001	Maize	extracellular	81.26	84.28
GSMUA_Achr4P25280_001	Banana	plastid	66.83	73.01
PGSC0003DMT400060071	Potato	peroxisome	40.33	68.7
Solyc02g033080.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	26.73	64.55
KRH71619	Soybean	cytosol	64.56	61.76
Solyc05g055590.1.1	Tomato	cytosol	45.94	60.63
CDY00667	Canola	cytosol, plastid	64.56	59.19
Bra001357.1-P	Field mustard	nucleus, plastid	64.44	58.7
CDX73929	Canola	nucleus, plastid	64.44	58.57
AT3G10390.3	Thale cress	plastid	64.92	58.12
VIT_13s0019g04820.t01	Wine grape	nucleus	67.3	54.97
PGSC0003DMT400019222	Potato	cytosol, plastid	63.6	53.51
Solyc11g008320.1.1	Tomato	nucleus	63.48	52.99
PGSC0003DMT400060365	Potato	plastid	34.25	52.95
TraesCS6A01G318300.1	Wheat	nucleus	45.11	45.99
TraesCS7A01G306400.1	Wheat	cytosol, nucleus, plasma membrane, plastid	41.29	45.59
Solyc05g055580.1.1	Tomato	cytosol, peroxisome, plastid	30.79	44.48
TraesCS2A01G548200.1	Wheat	plastid	18.62	31.84
TraesCS2A01G548100.1	Wheat	peroxisome	18.26	31.42
TraesCS2A01G467300.1	Wheat	peroxisome	17.06	29.55
TraesCS3A01G250700.1	Wheat	mitochondrion	15.27	25.1
TraesCS5A01G549600.1	Wheat	plastid	14.2	24.04
TraesCS4A01G039600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	13.25	23.72
TraesCS7A01G539200.1	Wheat	plasma membrane, vacuole	13.96	23.03
TraesCS7A01G378800.1	Wheat	cytosol	12.41	22.76
TraesCS6A01G405500.2	Wheat	nucleus	29.12	13.17

Protein Annotations

Gene3D:1.10.10.10	MapMan:12.3.3.8.1	Gene3D:3.50.50.60	Gene3D:3.90.660.10	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Homeobox-like_sf	InterPro:IPR007526
InterPro:IPR036188	InterPro:IPR036388	PFAM:PF01593	PFAM:PF04433	PFscan:PS50934	PANTHER:PTHR10742
PANTHER:PTHR10742:SF260	SUPFAM:SSF46689	SUPFAM:SSF51905	SUPFAM:SSF54373	InterPro:SWIRM	EnsemblPlantsGene:TraesCS2A01G407400
EnsemblPlants:TraesCS2A01G407400.1	InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:662966252..662969102

Molecular Weight (calculated)

90054.7 Da

IEP (calculated)

7.917

GRAVY (calculated)

-0.199

Length

838 amino acids

Sequence
(BLAST)

001: MHTAAHGSAL HGPRVNPRFI EQAEPLSPPP PAIMSDQQQP STLLPLASLP ANPNPTPPPV PAPTLALHIP ALPSPSKRKR TGFRRKVPSA ASPAPHPPVP
101: PSAADDIIVI NREPTAEAVT ALTAGFPADS LTDEEIEAGV VSDVGGIEQV NYILIRNHLL TRWRETFNSW LAKEPFASLI PPHCEHLLTS AYNFLVSHGH
201: VNFGVAPAIK ERLPKEPTRP NTVIVVGAGL AGLAAARHLL ASGFKVIVLE GRKRCGGRVY TKKMEGGGHS AAADLGGSVL TGTFGNPLGV VAKQLGLPMH
301: KIRDKCPLYR PDGSPVDPEV DKEVEGTYNK FLDNASHLRA AMGDVAMDIS LGAALETLRQ SDGGISSEEE INLFNWHIAN LEYANAGLSS RLSFAFWDQD
401: DPYDMGGDHC FLPGGNGRLV QALAENVPIV YERTVHTIRY GGDGVQVVVN GGQVYEGDMA LCTVPLGVLK NGGIKFVPEL PQRKLDSIKK LGFGLLNKVA
501: MLFPHVFWST DLDTFGHLTE NPSRRGEFFL FYSYATVAGG PLLMALVAGE AAHNFETTPP TDAVSSVLQI LRGIYEPQGV EVPDPLQSVC TRWGTDSFSL
601: GSYSHVAVGA SGDDYDILAE SVGDGRLFFA GEATTRRYPA TMHGAFITGV REAANINIHA TARATKTKVV KSPSTNAQAC ATLLVDLFRQ PDLEFGSFSV
701: IFGGKALDPK SPAILKVELG GPQKKSATEG GKKEQHHSNK SLFQQLQSHF NQQQQLYVYT LLSRQQAMEL REVRGGDEMR LHYLCETLGV KLVGRKGLGP
801: GADAVIASIK ADRNNSRTKS GPSKLRVRVS KPQPSAKS

Best Arabidopsis Sequence Match ( AT3G10390.1 )
(BLAST)

001: MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSGI LKAKSGALKR
801: KMIRRIKGPL PLKQSNNNGV SESIKSESLG NGKSLEQQQQ PRIVESIGGG SSMQGESKSL STGVASSSGG SLHVGGETMK KIEQ

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.