CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	10.39	82.73
PGSC0003DMT400060071	Potato	peroxisome	41.67	74.19
GSMUA_Achr4P25280_001	Banana	plastid	63.47	72.49
EES12649	Sorghum	plastid	63.36	68.69
Zm00001d002684_P001	Maize	extracellular	63.13	68.44
Os04t0560300-01	Rice	cytosol	63.13	68.19
TraesCS2B01G425100.1	Wheat	plastid	62.1	67.41
CDY00667	Canola	cytosol, plastid	69.18	66.3
Solyc02g033080.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	26.26	66.28
Bra001357.1-P	Field mustard	nucleus, plastid	69.29	65.98
CDX73929	Canola	nucleus, plastid	69.18	65.73
AT3G10390.3	Thale cress	plastid	69.41	64.96
TraesCS2A01G407400.1	Wheat	cytosol	61.76	64.56
TraesCS2D01G404400.1	Wheat	plastid	61.53	64.4
Solyc05g055590.1.1	Tomato	cytosol	46.58	64.25
VIT_13s0019g04820.t01	Wine grape	nucleus	74.2	63.35
HORVU2Hr1G096300.1	Barley	plastid	32.08	61.76
PGSC0003DMT400019222	Potato	cytosol, plastid	69.18	60.84
Solyc11g008320.1.1	Tomato	nucleus	68.95	60.16
KRH48463	Soybean	cytosol, peroxisome	24.43	58.63
PGSC0003DMT400060365	Potato	plastid	35.5	57.38
KRH55370	Soybean	nucleus	44.06	51.95
KRH39215	Soybean	nucleus	47.83	49.94
Solyc05g055580.1.1	Tomato	cytosol, peroxisome, plastid	30.94	46.72
KRH48462	Soybean	nucleus, plastid	19.41	46.2
KRG99036	Soybean	plasma membrane, vacuole	18.04	31.73
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	17.69	31.63
KRH73583	Soybean	cytosol, peroxisome, plastid	17.12	30.8
KRG98020	Soybean	cytosol	17.24	30.63
KRH20055	Soybean	cytosol	17.12	30.43
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	16.89	30.27
KRH72905	Soybean	peroxisome	16.55	29.35
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	16.21	28.74
KRH02713	Soybean	golgi	14.84	24.53
KRH19156	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.38	23.42
KRH32977	Soybean	plasma membrane	12.67	22.2
KRH39911	Soybean	plasma membrane	11.64	21.94
KRH13982	Soybean	plasma membrane	12.33	21.56
KRH12386	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	14.16	21.34
KRH37387	Soybean	golgi	14.38	21.0
KRH69303	Soybean	vacuole	8.56	19.48
KRH17390	Soybean	nucleus	30.14	13.94
KRH05909	Soybean	nucleus	30.02	13.79

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100786453	MapMan:12.3.3.8.1	Gene3D:3.50.50.60	Gene3D:3.90.660.10	UniProt:A0A0R0L4B1
EMBL:ACUP02000918	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf	EnsemblPlantsGene:GLYMA_02G159100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:Homeobox-like_sf	InterPro:IPR007526	InterPro:IPR036188	InterPro:IPR036388
EnsemblPlants:KRH71619	ProteinID:KRH71619	ProteinID:KRH71619.1	PFAM:PF01593	PFAM:PF04433	PFscan:PS50934
PANTHER:PTHR10742	PANTHER:PTHR10742:SF260	SUPFAM:SSF46689	SUPFAM:SSF51905	SUPFAM:SSF54373	InterPro:SWIRM
UniParc:UPI0006EDAA60	InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:17647909..17653253

Molecular Weight (calculated)

96423.3 Da

IEP (calculated)

8.958

GRAVY (calculated)

-0.162

Length

876 amino acids

Sequence
(BLAST)

001: MDPPLQFSSP QNPNPNPNHN VFLDPTSDSI PNLLQNPIHY LSFSVPKKRR RGRSQRNPAS FRLPPLTTLP TAANPSPSAS DEIIFINKEP KTEALIALTA
101: GFPADSLTEE EIDAAVLPVI GGIEQVNYTL IRNHIIAKWR ENVSNWVSKK TFLDYIPPHY HSLLDSAYNY LVSHGYINFG VASSIKERVP AEASRPAVIV
201: VGAGLAGLAA ARQLLRFGFK VTVLEGRKRA GGRVYTKKME GGNRMCAAAD LGGSVLTGTL GNPLGIVARQ LGELLHKVRD KCPLYCVNGM PVDPDMDVKV
301: ESAFNRLLDK ASRLRQLMGE VSVDVSLGAA LETFSQVYKD AVSDEEMNLF NWHLANLEYA NAGLLSNLSL AFWDQDDPYD MGGDHCFLPG GNGKLVQALS
401: ENVPILYEKT VHMIRYSGDG VQVTAGSQVF EGDMALCTVP LGVLKKGFIK FIPELPQRKL DGIKRLGFGL LNKVAMLFPH VFWEMDLDTF GHLSDDPSRR
501: GEFFLFYSYV TVAGGPLLIA LVAGEAAHKF ESMPPTDAVT RVLQILKGIY EPKGITVPEP IQTVCTRWGS DPFCFGSYSN VAVGASGDDY DILAESVGDG
601: RLFFAGEATT RRYPATMHGA FLSGLREAAN MAHHDNIRTL KMKVDKAPSN AHSCASLLAD LFREPDIEFG SFSVIFARKN TDPKSPAILR VTFNEARKKC
701: HEVAKQDQQH SNKLLFQQLQ SHFNQQQQLH VYTLLSRQQV IDLREVRGGD EMRLNYLCEK LGVKLVGRKG LGMNADSIID SIKAERGNRK PVSTSLALKP
801: GVSSKLKAAG IMKRKLVRRA KVVRKSNGSI NVRSAIKVSE EVKITNQVLP DVPVSDFGFS PWTNMQLITL GCFNII

Best Arabidopsis Sequence Match ( AT3G10390.3 )
(BLAST)

001: MNPPDNYVPS VSHSQFSTPP PPQSSSNTNT ETSLNPFPNS ISTSISNPSF EQMVSFSAPK KRRRGRSQRS MSSLNSLPVP NVGLLPGNSN FVSSSASSSG
101: RFNVEVVNGS NQTVKSYPGI GDEIITINKE ATTEALLALT AGFPADSLTE EEIEFGVVPI VGGIEQVNYI LIRNHIISKW RENISSWVTK EMFLNSIPKH
201: CSSLLDSAYN YLVTHGYINF GIAQAIKDKF PAQSSKSSVI IVGAGLSGLA AARQLMRFGF KVTVLEGRKR PGGRVYTKKM EANRVGAAAD LGGSVLTGTL
301: GNPLGIIARQ LGSSLYKVRD KCPLYRVDGK PVDPDVDIKV EVAFNQLLDK ASKLRQLMGD VSMDVSLGAA LETFRQVSGN DVATEEMGLF NWHLANLEYA
401: NAGLVSKLSL AFWDQDDPYD MGGDHCFLPG GNGRLVQALA ENVPILYEKT VQTIRYGSNG VKVTAGNQVY EGDMVLCTVP LGVLKNGSIK FVPELPQRKL
501: DCIKRLGFGL LNKVAMLFPY VFWSTDLDTF GHLTEDPNYR GEFFLFYSYA PVAGGALLIA LVAGEAAHKF ETMPPTDAVT RVLHILRGIY EPQGINVPDP
601: LQTVCTRWGG DPFSLGSYSN VAVGASGDDY DILAESVGDG RLFFAGEATT RRYPATMHGA FVTGLREAAN MAQSAKARGI RKRIDRNPSR NAHSCAILLA
701: DLFRDPDLEF GSFCIIFSRR NPDPKSPAIL RVTLSEPRKR NEDPKADQHS NKILFQQLQS HFNQQQQIQV YTLLTRQQAL DLREVRGGDE KRLYYLCETL
801: GVKLVGRKGL GVGADSVIAS IKAERTGRKL PSSSTSGTKS GILKAKSGAL KRKMIRRIKG PLPLKQSNNN GVSESIKSES LGNGKSLEQQ QQPRIVESIG
901: GGSSMQGESK SLSTGVASSS GGSLHVGGET MKKIEQ

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.