Factsheet for PGSC0003DMT400060071

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 2
plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	15.85	70.91
Solyc05g055590.1.1	Tomato	cytosol	91.06	70.55
PGSC0003DMT400060365	Potato	plastid	70.33	63.84
GSMUA_Achr4P25280_001	Banana	plastid	71.34	45.76
HORVU2Hr1G096300.1	Barley	plastid	40.24	43.52
EES12649	Sorghum	plastid	69.72	42.45
Zm00001d002684_P001	Maize	extracellular	69.31	42.2
Os04t0560300-01	Rice	cytosol	69.51	42.17
TraesCS2B01G425100.1	Wheat	plastid	68.9	42.01
KRH71619	Soybean	cytosol	74.19	41.67
TraesCS2D01G404400.1	Wheat	plastid	68.7	40.38
TraesCS2A01G407400.1	Wheat	cytosol	68.7	40.33
CDY00667	Canola	cytosol, plastid	72.76	39.17
PGSC0003DMT400019222	Potato	cytosol, plastid	78.86	38.96
CDX73929	Canola	nucleus, plastid	72.76	38.83
Bra001357.1-P	Field mustard	nucleus, plastid	72.56	38.8
AT3G10390.3	Thale cress	plastid	73.17	38.46
PGSC0003DMT400049658	Potato	cytosol	57.11	37.02
VIT_13s0019g04820.t01	Wine grape	nucleus	76.22	36.55
PGSC0003DMT400095293	Potato	nucleus	59.96	36.33
PGSC0003DMT400074125	Potato	plastid	30.89	31.15
PGSC0003DMT400061872	Potato	cytosol	29.88	30.75
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	30.49	30.61
PGSC0003DMT400050770	Potato	cytosol	29.07	28.89
PGSC0003DMT400055123	Potato	cytosol	25.41	24.04
PGSC0003DMT400094539	Potato	golgi	26.02	23.7
PGSC0003DMT400045965	Potato	endoplasmic reticulum	23.78	22.5
PGSC0003DMT400017667	Potato	vacuole	21.75	21.62
PGSC0003DMT400009649	Potato	cytosol	41.67	15.82
PGSC0003DMT400000891	Potato	endoplasmic reticulum	25.41	15.61

Protein Annotations

EnsemblPlants:PGSC0003DMT400060071	EnsemblPlantsGene:PGSC0003DMG402023368	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR10742	PFAM:PF01593	PGSC:PGSC0003DMG402023368	SEG:seg	SUPFAM:SSF51905
SUPFAM:SSF54373	UniParc:UPI000294921E	UniProt:M1C563	MapMan:12.3.3.8.1	:	:

Description

Amine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG402023368]

Coordinates

chr5:-:51246736..51248821

Molecular Weight (calculated)

53786.9 Da

IEP (calculated)

6.741

GRAVY (calculated)

0.024

Length

492 amino acids

Sequence
(BLAST)

001: MFVDIIPERC SGLLDSAYNY LLSYEYVNFG VALAIKDKIP TRPSKGKVII IGAGLAGLAA ARQLMLFGFE VIVLEGRKRA GGRVYTKKME GGNKVATADL
101: GGSVLTGTLG NPLGLLARQL SYTLHTVRDQ CPLYRADGKP VDEYLDKKVE VAYNELLDKA SKVRQELSPI ISLGEALETL RKDFSVAMND EEMNLFNWHL
201: ANLEYANAGL LSQLSLAFWD QDDPYDMGGD HCFLPGGNGR LVHALAENVP IMFEKTVYAI RYGRDSVKVI TAGQLFEGDM ALCTVPLGVL KSGSITFIPE
301: LPQQKLDTIK RLGFGLLNKV ALLFPYVFWD SNVDTFGHVA DDSSCRGEFF LFYNYATVAG GPLLLALVAG KAAHKFERMA PTDAVTKVLQ ILKGIYEPQG
401: INVPNPIQIV FTSWGSDPFS FGSYSNVAVG ASGDDYDILA ETVGEGRLFF AGEATTRHYP ATMHGAFLTG LRAKMAHHAS VRTSHLQVEK KK

Best Arabidopsis Sequence Match ( AT3G10390.2 )
(BLAST)

001: MNPPDNYVPS VSHSQFSTPP PPQSSSNTNT ETSLNPFPNS ISTSISNPSF EQMVSFSAPK KRRRGRSQRS MSSLNSLPVP NVGLLPGNSN FVSSSASSSG
101: RFNVEVVNGS NQTVKSYPGI GDEIITINKE ATTEALLALT AGFPADSLTE EEIEFGVVPI VGGIEQVNYI LIRNHIISKW RENISSWVTK EMFLNSIPKH
201: CSSLLDSAYN YLVTHGYINF GIAQAIKDKF PAQSSKSSVI IVGAGLSGLA AARQLMRFGF KVTVLEGRKR PGGRVYTKKM EANRVGAAAD LGGSVLTGTL
301: GNPLGIIARQ LGSSLYKVRD KCPLYRVDGK PVDPDVDIKV EVAFNQLLDK ASKLRQLMGD VSMDVSLGAA LETFRQVSGN DVATEEMGLF NWHLANLEYA
401: NAGLVSKLSL AFWDQDDPYD MGGDHCFLPG GNGRLVQALA ENVPILYEKT VQTIRYGSNG VKVTAGNQVY EGDMVLCTVP LGVLKNGSIK FVPELPQRKL
501: DCIKRLGFGL LNKVAMLFPY VFWSTDLDTF GHLTEDPNYR GEFFLFYSYA PVAGGALLIA LVAGEAAHKF ETMPPTDAVT RVLHILRGIY EPQGINVPDP
601: LQTVCTRWGG DPFSLGSYSN VAVGASGDDY DILAESVGDG RLFFAGEATT RRYPATMHGA FVTGLREAAN MAQSAKARGI RKRIDRNPSR NAHSCAILLA
701: DLFRDPDLEF GSFCIIFSRR NPDPKSPAIL RVTLSEPRKR NEDPKADQHS NKILFQQLQS HFNQQQQIQV YTLLTRQQAL DLREVRGGDE KRLYYLCETL
801: GVKLVGRKGL GVGADSVIAS IKAERTGRKL PSSSTSGTKS GILKAKSGAL KRKMIRRIKG PLPLKQSNNN GVSESIKSES LGNGKSLEQQ QQPRIVESIG
901: GGSSMQGESK SLSTGVASSS GIHFS

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.