Factsheet for Zm00001d002684_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12649	Sorghum	plastid	96.04	96.04
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	12.75	93.64
Os04t0560300-01	Rice	cytosol	88.37	88.04
TraesCS2B01G425100.1	Wheat	plastid	84.53	84.63
HORVU2Hr1G096300.1	Barley	plastid	46.16	81.98
TraesCS2A01G407400.1	Wheat	cytosol	84.28	81.26
TraesCS2D01G404400.1	Wheat	plastid	84.16	81.24
GSMUA_Achr4P25280_001	Banana	plastid	71.29	75.1
PGSC0003DMT400060071	Potato	peroxisome	42.2	69.31
Solyc02g033080.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	27.85	64.84
KRH71619	Soybean	cytosol	68.44	63.13
Solyc05g055590.1.1	Tomato	cytosol	47.4	60.31
CDY00667	Canola	cytosol, plastid	67.45	59.63
Bra001357.1-P	Field mustard	nucleus, plastid	67.57	59.35
CDX73929	Canola	nucleus, plastid	67.57	59.22
AT3G10390.3	Thale cress	plastid	68.56	59.19
VIT_13s0019g04820.t01	Wine grape	nucleus	71.16	56.04
PGSC0003DMT400019222	Potato	cytosol, plastid	67.08	54.42
Solyc11g008320.1.1	Tomato	nucleus	66.71	53.69
PGSC0003DMT400060365	Potato	plastid	35.89	53.51
Solyc05g055580.1.1	Tomato	cytosol, peroxisome, plastid	32.43	45.17
Zm00001d018102_P001	Maize	nucleus	47.15	44.88
Zm00001d024647_P001	Maize	mitochondrion	42.08	44.56
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	19.31	31.84
Zm00001d026334_P001	Maize	peroxisome	18.07	30.29
Zm00001d002266_P003	Maize	peroxisome	18.07	30.23
Zm00001d026586_P003	Maize	peroxisome, plastid	19.68	30.06
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	17.33	29.66
Zm00001d028172_P001	Maize	cytosol	11.88	25.95
Zm00001d043681_P001	Maize	mitochondrion	15.97	25.6
Zm00001d024281_P001	Maize	extracellular	15.59	25.2
Zm00001d029714_P001	Maize	extracellular	28.96	12.9

Protein Annotations

Gene3D:1.10.10.10	MapMan:12.3.3.8.1	Gene3D:3.50.50.60	Gene3D:3.90.660.10	UniProt:A0A1D6E3G3	InterPro:Amino_oxidase
InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Homeobox-like_sf
InterPro:IPR007526	InterPro:IPR036188	InterPro:IPR036388	ProteinID:ONM15086.1	PFAM:PF01593	PFscan:PS50934
PANTHER:PTHR10742	PANTHER:PTHR10742:SF260	SUPFAM:SSF46689	SUPFAM:SSF51905	SUPFAM:SSF54373	InterPro:SWIRM
UniParc:UPI0002215288	InterPro:WH-like_DNA-bd_sf	EnsemblPlantsGene:Zm00001d002684	EnsemblPlants:Zm00001d002684_P001	EnsemblPlants:Zm00001d002684_T001	SEG:seg

Description

Flowering locus D

Coordinates

chr2:+:19208728..19211883

Molecular Weight (calculated)

87103.5 Da

IEP (calculated)

8.500

GRAVY (calculated)

-0.153

Length

808 amino acids

Sequence
(BLAST)

001: MSEQAPPYAP FSLVSSLAPE PSSTPSPNPT LVLPSPAFPN KRKRTGFRRK VPSGAPAAPA PSLVAPSQPP LPASAADDII VINREPTAEA VTALTAGFPA
101: DSLTDEEIEA GVVSDVGGIE QVNYILIRNH LLCRWRETYN SWLAKEPFAM LIPPHCEHLL TAAYSFLVSN SYVNFGVAPA IKERIPKEPT RPSTVVVVGA
201: GLAGLAAARQ LVAFGFKVIV LEGRKRCGGR VYTKKMEGGG RLAAADLGGS VLTGTFGNPL GIVAKQLGLP MHKIRDKCPL YRPDGSPVDP EVDKKVEITF
301: NRLLDKSSNL RASMGKVAAD VSLGAALETL RQVDGGISTE EDMNLFNWHL ANLEYANAGL LSRLSLAFWD QDDPYDMGGD HCFLPGGNGK LVQALAENVP
401: IVYERTVHTI RYGGDGVQVV VNGGQVYEGD MALCTVPLGV LKNGGIKFVP ELPQRKLDCI KRLGFGLLNK VSMLFPHVFW STDLDTFGHL VEDPRRRGEF
501: FLFYSYATVA GGPLLMALVA GEAAHNFETM PPTDAVSSVL QILRGIYEPQ GIEVPDPLQS VCTRWGTDSF SLGSYSHVAV GASGDDYDAL AESVGDGRLF
601: FAGEATTRRY PATMHGAFIS GLREAANITL HANARATKSK VDRSPSTNTQ ACAATLTDLF RQPDLEFGSF SVIFGGKASD PKSPAILKVE LGASRKKNTA
701: EGVKTEQNHS NKLLFQQLQS HFNQQQQLYV YTLLSRQQAM ELREVRGGDD MRLHYLCEKL GVKLVGRKGL GPGADAVIAS IKAERNRSRT RPGPSKLKKS
801: LKPNVAAS

Best Arabidopsis Sequence Match ( AT3G10390.1 )
(BLAST)

001: MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSGI LKAKSGALKR
801: KMIRRIKGPL PLKQSNNNGV SESIKSESLG NGKSLEQQQQ PRIVESIGGG SSMQGESKSL STGVASSSGG SLHVGGETMK KIEQ

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.