Factsheet for Zm00001d026586_P003

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13072	Sorghum	plastid	87.71	94.5
Os04t0671300-01	Rice	peroxisome	82.61	88.82
HORVU2Hr1G121050.1	Barley	peroxisome	82.04	88.21
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	81.85	88.01
TraesCS2A01G548100.1	Wheat	peroxisome	80.72	87.68
TraesCS2B01G579000.1	Wheat	peroxisome	82.04	82.51
GSMUA_AchrUn_...	Banana	plastid	69.19	73.49
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	67.86	73.27
GSMUA_Achr9P21250_001	Banana	plastid	66.73	72.48
Solyc03g031880.2.1	Tomato	cytosol	60.87	67.36
PGSC0003DMT400061872	Potato	cytosol	60.49	66.95
KRG98020	Soybean	cytosol	62.38	66.94
KRH20055	Soybean	cytosol	61.81	66.33
PGSC0003DMT400050770	Potato	cytosol	61.44	65.66
KRH72905	Soybean	peroxisome	61.25	65.59
Solyc02g081390.2.1	Tomato	cytosol	61.25	65.45
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	60.49	64.78
VIT_04s0043g00220.t01	Wine grape	plastid	59.74	64.49
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	56.9	60.56
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	55.95	59.56
CDY16424	Canola	cytosol, peroxisome, plastid	55.58	58.45
Zm00001d002266_P003	Maize	peroxisome	53.12	58.18
CDY54438	Canola	cytosol, peroxisome, plastid	55.58	57.65
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	27.79	57.65
Zm00001d026334_P001	Maize	peroxisome	52.36	57.47
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	50.28	56.36
Zm00001d024281_P001	Maize	extracellular	23.82	25.2
Zm00001d028172_P001	Maize	cytosol	17.58	25.14
Zm00001d043681_P001	Maize	mitochondrion	21.93	23.02
Zm00001d024647_P001	Maize	mitochondrion	29.11	20.18
Zm00001d002684_P001	Maize	extracellular	30.06	19.68
Zm00001d018102_P001	Maize	nucleus	27.22	16.96
Zm00001d029714_P001	Maize	extracellular	31.38	9.15

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	UniProt:A0A1D6JHP9	ProteinID:AQK47147.1	InterPro:Amino_oxidase
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0016491	GO:GO:0016740	GO:GO:0032259	GO:GO:0055114	InterPro:IPR036188
PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	SUPFAM:SSF51905	SUPFAM:SSF54373
UniParc:UPI00084522F7	EnsemblPlantsGene:Zm00001d026586	EnsemblPlants:Zm00001d026586_P003	EnsemblPlants:Zm00001d026586_T003	SEG:seg	:

Description

Lysine-specific histone demethylase 1

Coordinates

chr10:-:148397983..148402287

Molecular Weight (calculated)

57957.6 Da

IEP (calculated)

5.587

GRAVY (calculated)

0.022

Length

529 amino acids

Sequence
(BLAST)

001: MDQPPNGFAA GGFFTHIDGQ NRSPPSVIVI GGGISGIAAA RALSTASFKV TLLESRDRPG GRVHTDYSFG CPIDMGASWL HGVCNENSLA PLIRMLGLRL
101: YRTSGDNSVL YDHDLESYAL FDKHGQQVPQ EIVSKVGETF ERILKETVIV RDEHANDMPL FQAIAIVLDR NPHMKLQGLE YEVLQWCICR LEAWFATDMD
201: NISLKTWDQE HVLTGGHGLM VNGYDPVIRA LAQGLDIHLN HRVTKIIQRY NKVIVCVEDG ASFVADAAIV TVPLGVLKAN IIKFEPELPK EKLSAIADLG
301: VGIENKIALK FDTVFWPDVE VIGRVAPTSN ACGYFLNLNK ATGNPVLVCM VAGRFAYEIE KLSDEESVNF VMSQLRNMLP QATDPVKYST GKHSTCFRFQ
401: TVWWVDDGSM APDVFLGSLL QVQYLVSRWG SDPNSLGSYS CDLVGKPADL YERFCAPVGS LFFAGEAACI DHSGSVHGAY SSGIAAAEDC RRRLSAQLGI
501: SAGLFQVGKA AMREEMTAEA MVPFQISRL

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.