Factsheet for Bra039742.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16424	Canola	cytosol, peroxisome, plastid	99.4	98.21
CDY54438	Canola	cytosol, peroxisome, plastid	98.79	96.27
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	93.96	93.96
VIT_04s0043g00220.t01	Wine grape	plastid	70.42	71.43
KRG98020	Soybean	cytosol	70.02	70.59
KRH20055	Soybean	cytosol	69.62	70.18
Solyc03g031880.2.1	Tomato	cytosol	67.0	69.67
PGSC0003DMT400061872	Potato	cytosol	66.8	69.46
PGSC0003DMT400050770	Potato	cytosol	68.21	68.48
Solyc02g081390.2.1	Tomato	cytosol	68.01	68.28
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	66.8	67.21
KRH72905	Soybean	peroxisome	66.6	67.0
GSMUA_Achr9P21250_001	Banana	plastid	63.18	64.48
GSMUA_AchrUn_...	Banana	plastid	62.78	62.65
TraesCS2A01G548100.1	Wheat	peroxisome	61.17	62.42
Os04t0671300-01	Rice	peroxisome	61.17	61.79
HORVU2Hr1G121050.1	Barley	peroxisome	61.17	61.79
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	60.76	61.38
Bra037741.1-P	Field mustard	peroxisome	59.56	61.03
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	31.19	60.78
EES13072	Sorghum	plastid	59.96	60.69
Bra004737.1-P	Field mustard	peroxisome	59.76	60.61
Bra000284.1-P	Field mustard	cytosol	58.15	60.21
Bra003362.1-P	Field mustard	cytosol	58.55	59.51
EES13070	Sorghum	cytosol, peroxisome, plastid	58.15	59.34
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	58.15	58.98
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	57.75	58.93
TraesCS2B01G579000.1	Wheat	peroxisome	61.37	57.98
TraesCS2B01G579100.1	Wheat	plastid	55.94	56.73
HORVU2Hr1G121060.1	Barley	plastid	55.73	56.65
TraesCS2A01G548200.1	Wheat	plastid	55.73	56.53
Zm00001d026586_P003	Maize	peroxisome, plastid	59.56	55.95
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	56.14	51.67
Bra006210.1-P	Field mustard	extracellular	24.95	26.33
Bra024137.1-P	Field mustard	mitochondrion	23.14	22.33
Bra011132.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	23.14	21.26
Bra021500.1-P	Field mustard	cytosol	29.78	20.25
Bra027014.1-P	Field mustard	cytosol	27.77	19.77
Bra001357.1-P	Field mustard	nucleus, plastid	29.38	15.87
Bra040571.1-P	Field mustard	nucleus	34.41	10.83

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	InterPro:Amino_oxidase	EnsemblPlantsGene:Bra039742	EnsemblPlants:Bra039742.1
EnsemblPlants:Bra039742.1-P	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006598	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0046592	GO:GO:0055114
InterPro:IPR036188	UniProt:M4FF70	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264
SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI0002545944	:	:	:

Description

AT1G65840 (E=1e-273) ATPAO4, PAO4 | ATPAO4 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 4); amine oxidase/ polyamine oxidase

Coordinates

chrA02:+:9686521..9689157

Molecular Weight (calculated)

55020.9 Da

IEP (calculated)

4.824

GRAVY (calculated)

-0.065

Length

497 amino acids

Sequence
(BLAST)

001: MDKKVSFTDE LPDVTISALL QKQNNVVQPC VIVIGSGISG LAAARSLSEA SFNVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSND NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLYDMHGN KIPPQLVTQV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRHPELRQ EGIAYEVLQW YICRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDID IRLNHRVTKV SRTSNNKVIV EVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISDLGVGNEN KIALRFENVF WPNVEFLGMV APTSYSCGYF LNLHKATGHP VLVYMAAGNL AKDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY ARLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMR NSDILETGTV PLQISRM

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.