Factsheet for TraesCS2A01G548200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G579100.1	Wheat	plastid	97.96	97.96
HORVU2Hr1G121060.1	Barley	plastid	97.14	97.34
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	98.37	89.26
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	85.1	85.63
EES13070	Sorghum	cytosol, peroxisome, plastid	84.08	84.6
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	82.86	82.86
TraesCS2A01G548100.1	Wheat	peroxisome	70.41	70.84
GSMUA_Achr9P21250_001	Banana	plastid	67.55	67.97
GSMUA_AchrUn_...	Banana	plastid	67.96	66.87
Solyc03g031880.2.1	Tomato	cytosol	61.63	63.18
PGSC0003DMT400061872	Potato	cytosol	61.43	62.97
PGSC0003DMT400050770	Potato	cytosol	62.86	62.22
KRG98020	Soybean	cytosol	62.45	62.07
Solyc02g081390.2.1	Tomato	cytosol	62.45	61.82
KRH20055	Soybean	cytosol	62.04	61.66
KRH72905	Soybean	peroxisome	62.04	61.54
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	60.82	60.32
VIT_04s0043g00220.t01	Wine grape	plastid	60.0	60.0
TraesCS2A01G467300.1	Wheat	peroxisome	56.53	57.23
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	57.55	56.74
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	56.53	55.73
CDY16424	Canola	cytosol, peroxisome, plastid	56.12	54.67
CDY54438	Canola	cytosol, peroxisome, plastid	56.53	54.31
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	26.73	51.37
TraesCS5A01G549600.1	Wheat	plastid	24.29	24.04
TraesCS4A01G039600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	22.04	23.08
TraesCS7A01G378800.1	Wheat	cytosol	21.43	22.98
TraesCS7A01G539200.1	Wheat	plasma membrane, vacuole	23.67	22.83
TraesCS3A01G250700.1	Wheat	mitochondrion	22.65	21.76
TraesCS7A01G306400.1	Wheat	cytosol, nucleus, plasma membrane, plastid	31.63	20.42
TraesCS2A01G407400.1	Wheat	cytosol	31.84	18.62
TraesCS6A01G318300.1	Wheat	nucleus	31.22	18.61
TraesCS6A01G405500.2	Wheat	nucleus	33.27	8.8

Protein Annotations

EnsemblPlants:TraesCS2A01G548200.1	EnsemblPlantsGene:TraesCS2A01G548200	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	InterPro:IPR036188	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	PFAM:PF01593	PRINTS:PR00757
SEG:seg	SUPFAM:SSF51905	SUPFAM:SSF54373	MapMan:8.5.2.2	:	:

Description

No Description!

Coordinates

chr2A:+:755974158..755976640

Molecular Weight (calculated)

53269.1 Da

IEP (calculated)

5.326

GRAVY (calculated)

-0.027

Length

490 amino acids

Sequence
(BLAST)

001: MDPNSFKTGG LLLPTIERRC ASPPSVIVIG GGISGIAAAR VLSNSSFEVT VLESRDRIGG RVHTDYSFGC PIDMGASWLH GVSNENSLAP LIGHLGLRLY
101: HTSGDNSVLY DHDLESCSLF DKNGLAVPME TAAKVGVIFE KILKETVKLR DEQEHDMPLE QAISMVLERH PDLKLEGLDD RILQWCVCRL EAWFAADADE
201: ISLKNWDQEH VLTGGHGLMV DGYLPVIQAL AQGLDIRLNQ RVKKIARQQK GVTVTIEDGT QYSADACIIT VPLGVLKANI IKFEPELPSW KSSAIADLGV
301: GIENKVAMHF DKAFWPNVQV LGMVGPTPKT CGYFLNLHKA TGHPVLVFMA AGRFAQDVEK LSDKEAVELV MCHLRKMIPD ATEPNKYLVS RWGSDPNSLG
401: SYSCDLVGKP SDVCERFSAP VESVLYFAGE AASAEHSGAV HGAYSSGMEA AEECRRRLLM SKGVPDLVQV AGAACEEMAD VVAPLQICRT

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.