Factsheet for TraesCS2D01G549300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
peroxisome 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G579100.1	Wheat	plastid	89.44	98.57
TraesCS2A01G548200.1	Wheat	plastid	89.26	98.37
HORVU2Hr1G121060.1	Barley	plastid	89.07	98.36
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	76.85	85.22
EES13070	Sorghum	cytosol, peroxisome, plastid	76.3	84.6
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	75.56	83.27
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	64.81	71.14
GSMUA_Achr9P21250_001	Banana	plastid	61.67	68.38
GSMUA_AchrUn_...	Banana	plastid	62.22	67.47
Solyc03g031880.2.1	Tomato	cytosol	56.3	63.6
PGSC0003DMT400061872	Potato	cytosol	56.11	63.39
PGSC0003DMT400050770	Potato	cytosol	57.41	62.63
Solyc02g081390.2.1	Tomato	cytosol	57.04	62.22
KRG98020	Soybean	cytosol	56.67	62.07
KRH72905	Soybean	peroxisome	56.48	61.74
KRH20055	Soybean	cytosol	56.3	61.66
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	55.37	60.53
VIT_04s0043g00220.t01	Wine grape	plastid	54.81	60.41
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	52.59	57.14
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	51.11	57.02
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	51.67	56.14
CDY16424	Canola	cytosol, peroxisome, plastid	51.3	55.07
CDY54438	Canola	cytosol, peroxisome, plastid	51.67	54.71
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	24.26	51.37
TraesCS4D01G265800.1	Wheat	unclear	21.67	23.73
TraesCS7D01G524900.1	Wheat	plasma membrane	21.85	23.69
TraesCS7D01G375700.1	Wheat	extracellular	21.3	22.86
TraesCS3D01G251100.1	Wheat	golgi	20.37	22.4
TraesCS7D01G303200.1	Wheat	cytosol, nucleus, plasma membrane, plastid	28.89	20.55
TraesCS2D01G404400.1	Wheat	plastid	29.44	19.0
TraesCS6D01G297500.1	Wheat	plastid	28.7	17.67
TraesCS6D01G389200.1	Wheat	nucleus	30.37	8.86

Protein Annotations

EnsemblPlants:TraesCS2D01G549300.1	EnsemblPlantsGene:TraesCS2D01G549300	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	InterPro:IPR036188	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	PFAM:PF01593	PRINTS:PR00757
SEG:seg	SUPFAM:SSF51905	SUPFAM:SSF54373	MapMan:8.5.2.2	:	:

Description

No Description!

Coordinates

chr2D:+:624778620..624781344

Molecular Weight (calculated)

58751.7 Da

IEP (calculated)

5.871

GRAVY (calculated)

0.002

Length

540 amino acids

Sequence
(BLAST)

001: MSCLTFRRSA ADASRLQDGL LVFMFFISIP IRSLNTSSSS SRRATVAPAA MDPNSFKTGG LLLPTIERRC ASPPSVIVIG GGISGIAAAR VLSNSSFEVT
101: VLESRDRIGG RVHTDYSFGC PIDMGASWLH GVSNENSLAP LISHLGLRLY HTSGDNSVLY DHDLESCSLF DKNGLAVPME TAAKVGVIFE KILKETVKLR
201: DEQEHDMPLE QAISMVLERH PDLKLEGLDD RILQWCVCRL EAWFAADADE ISLKNWDQEH VLTGGHGLMV DGYFPVIQAL AQGLDIRLNQ RVKKIARQQK
301: GVTVTIEDGT QYSADACIIT VPLGVLKANI IKFEPELPSW KSSAIADLGV GIENKVAMHF DKAFWPNVQV LGMVGPTPKT CGYFLNLHKA TGHPVLVFMA
401: AGRFAQDVEK LSDKEAVELV MCHLRKMIPD ATEPSQYLVS RWGSDPNSLG SYSCDLVGKP SDVCERFSAP VESVLYFAGE AASAEHSGAV HGAYSSGMDA
501: AEECRRRLLM RKGVPDLVQV GAAACEEMAD VVAPLQICRT

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.