Factsheet for GSMUA_Achr9P21250_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
peroxisome 2
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plastid	87.89	85.94
TraesCS2A01G548100.1	Wheat	peroxisome	76.39	76.39
Os04t0671300-01	Rice	peroxisome	76.39	75.61
HORVU2Hr1G121050.1	Barley	peroxisome	76.18	75.41
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	76.18	75.41
EES13072	Sorghum	plastid	73.92	73.32
Solyc02g081390.2.1	Tomato	cytosol	72.69	71.52
PGSC0003DMT400050770	Potato	cytosol	72.28	71.11
TraesCS2B01G579000.1	Wheat	peroxisome	76.59	70.91
PGSC0003DMT400061872	Potato	cytosol	69.4	70.71
Solyc03g031880.2.1	Tomato	cytosol	69.2	70.5
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	70.23	70.23
EES13070	Sorghum	cytosol, peroxisome, plastid	69.82	69.82
VIT_04s0043g00220.t01	Wine grape	plastid	70.23	69.8
KRG98020	Soybean	cytosol	70.02	69.17
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	68.99	68.57
KRH20055	Soybean	cytosol	69.2	68.36
HORVU2Hr1G121060.1	Barley	plastid	68.17	67.89
TraesCS2A01G548200.1	Wheat	plastid	67.97	67.55
TraesCS2B01G579100.1	Wheat	plastid	67.97	67.55
KRH72905	Soybean	peroxisome	67.97	67.0
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	67.76	66.8
Zm00001d026586_P003	Maize	peroxisome, plastid	72.48	66.73
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	64.68	63.38
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	64.48	63.18
CDY16424	Canola	cytosol, peroxisome, plastid	64.27	62.23
GSMUA_Achr5P00660_001	Banana	peroxisome	61.6	61.86
CDY54438	Canola	cytosol, peroxisome, plastid	64.68	61.76
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	68.38	61.67
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	32.03	61.18
GSMUA_Achr11P...	Banana	mitochondrion	60.99	57.45
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	13.96	25.0
GSMUA_Achr6P24880_001	Banana	cytosol	14.17	24.47
GSMUA_Achr5P08640_001	Banana	cytosol, nucleus, peroxisome	22.38	24.11
GSMUA_Achr3P32350_001	Banana	mitochondrion	23.2	22.33
GSMUA_Achr3P06520_001	Banana	extracellular, nucleus, peroxisome	13.35	21.1
GSMUA_Achr5P26260_001	Banana	plastid	29.77	20.95
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.84	19.9
GSMUA_Achr4P25280_001	Banana	plastid	31.01	19.69
GSMUA_Achr6P24900_001	Banana	vacuole	11.7	18.75
GSMUA_Achr9P14930_001	Banana	nucleus	26.69	18.57
GSMUA_Achr6P24870_001	Banana	vacuole	9.45	18.11
GSMUA_Achr2P09900_001	Banana	cytosol	32.85	11.31

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr9G21250_001	EnsemblPlants:GSMUA_Achr9P21250_001	EnsemblPlants:GSMUA_Achr9T21250_001	InterPro:IPR036188	UniProt:M0U284	PFAM:PF01593
PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI000294CE03
SEG:seg	:	:	:	:	:

Description

Probable polyamine oxidase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr9G21250_001]

Coordinates

chr9:-:26291559..26299822

Molecular Weight (calculated)

53776.4 Da

IEP (calculated)

5.912

GRAVY (calculated)

-0.029

Length

487 amino acids

Sequence
(BLAST)

001: MTSKGSSSRK NFGLLVSHVE RPQPSVIVIG GGISGIAAAR ALSNASFNVI LLESRNRLGG RVHTDHSFGC PVDMGASWLH GVCNENSLAP LIRGLGLRLY
101: RTSGDNSVLY DHDLESYALF DKDGNQVPQQ VVTKVGEAFE RILKETEKVR NEHVVDMSLS QAISFVLERY PQLRQEGMAH EVLQWFICRL EAWFAADADT
201: ISLKNWDQEH VLSGGHGLML QGYYPVIQAL SEDLDIRLNH RVKKIAQCNN RVIVTVEDGN TFVADAAIIT VPLGVLKANL IEFEPKLPEW KLSAISDIGV
301: GIENKIALRF SNVFWPNVEF LGLVAQKSYA CGYFLNLHKA TGHPILVYMA AGRFAYDMEK LSDEEAVNFV MLQLKKMIPD ATDPIQHLVS HWGTDGDSLG
401: SYSCDLVGKP ADIYERFCAP VDNLYFAGEA ASADHSGSVH GAYTSGVMAA EVCQRHLSVQ HGISDLFQLV MREELSEAMV PLQISRM

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.