Factsheet for GSMUA_Achr5P08640_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	37.17	61.76
VIT_01s0127g00770.t01	Wine grape	cytosol	11.73	58.24
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	63.5	57.98
GSMUA_Achr6P24880_001	Banana	cytosol	36.06	57.8
GSMUA_Achr6P24870_001	Banana	vacuole	32.3	57.48
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	60.18	55.62
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	61.06	54.65
GSMUA_Achr6P24900_001	Banana	vacuole	36.5	54.28
Bra006210.1-P	Field mustard	extracellular	49.34	47.35
CDX70516	Canola	extracellular	48.89	46.92
AT5G13700.1	Thale cress	extracellular	48.67	46.61
CDX78534	Canola	extracellular	49.34	46.46
KRH39911	Soybean	plasma membrane	47.35	46.02
KRH13982	Soybean	plasma membrane	49.34	44.51
KRH32977	Soybean	plasma membrane	49.12	44.4
Solyc01g087590.2.1	Tomato	vacuole	47.35	43.06
PGSC0003DMT400017667	Potato	vacuole	47.12	43.03
KRH69303	Soybean	vacuole	32.96	38.7
GSMUA_Achr5P00660_001	Banana	peroxisome	25.0	23.3
GSMUA_Achr9P21250_001	Banana	plastid	24.11	22.38
GSMUA_AchrUn_...	Banana	plastid	24.11	21.89
GSMUA_Achr11P...	Banana	mitochondrion	23.89	20.89
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.14	19.9
GSMUA_Achr3P32350_001	Banana	mitochondrion	22.12	19.76
GSMUA_Achr3P06520_001	Banana	extracellular, nucleus, peroxisome	11.06	16.23
GSMUA_Achr5P26260_001	Banana	plastid	22.35	14.6
GSMUA_Achr4P25280_001	Banana	plastid	24.34	14.34
GSMUA_Achr9P14930_001	Banana	nucleus	21.02	13.57
GSMUA_Achr2P09900_001	Banana	cytosol	24.11	7.7

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.1	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr5G08640_001	EnsemblPlants:GSMUA_Achr5P08640_001	EnsemblPlants:GSMUA_Achr5T08640_001	InterPro:IPR036188	UniProt:M0SWU3	PFAM:PF01593
PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF313	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI000296A644
SEG:seg	:	:	:	:	:

Description

Polyamine oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr5G08640_001]

Coordinates

chr5:+:6287297..6289188

Molecular Weight (calculated)

51433.4 Da

IEP (calculated)

5.217

GRAVY (calculated)

-0.404

Length

452 amino acids

Sequence
(BLAST)

001: MDSASVIIIG AGMSGISAAK TLSDAGVKEI LILEATNRIG GRIRNTYFAD LSVETGANWI EGVHGEKQNP IWEMAQQLGL RTFRSDYSNL SSNTYKQDGG
101: RYEKAAVEAA IDESEKIHSL GEEYSKTLPP SGRNDISIST FQRLENKIPS TPLEMIVDYY SYDYEFAEPP RVTSLQNTVP LPTFDDFGDN VYFVADERGY
201: EILVYNLASM FLETNSHGVI VDPRLQLGKV ATEIQYSGDG ATVSTDDRSS YRADFVLVSV SIGVLQSDLI KFNPVLPKWK ILALYEFDMA VYTKIFLKFP
301: FKFWPDGDDT EFFLYASKRR GYYPLWQHFE KQYPGANILM VTVTDEESRR IEQQDESTTK KEAMEVLRSM FGKDIPEATD ILVPRWWSNK FFRGSFSNWP
401: LGVNRHEFDS IKAPIKRLYF TGEHTSEHYN GYVHGAYLAG LHHLHDQSHH HS

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.