Factsheet for GSMUA_Achr6P24900_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24870_001	Banana	vacuole	66.45	79.53
GSMUA_Achr5P08640_001	Banana	cytosol, nucleus, peroxisome	54.28	36.5
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	57.89	35.56
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	52.96	32.92
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	50.0	30.1
KRH69303	Soybean	vacuole	31.25	24.68
CDX70516	Canola	extracellular	34.21	22.08
CDX78534	Canola	extracellular	34.21	21.67
Bra006210.1-P	Field mustard	extracellular	33.55	21.66
KRH39911	Soybean	plasma membrane	32.57	21.29
KRH13982	Soybean	plasma membrane	34.87	21.16
AT5G13700.1	Thale cress	extracellular	32.57	20.97
Solyc01g087590.2.1	Tomato	vacuole	33.55	20.52
PGSC0003DMT400017667	Potato	vacuole	32.89	20.2
KRH32977	Soybean	plasma membrane	32.89	20.0
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.08	14.08
GSMUA_Achr5P00660_001	Banana	peroxisome	20.39	12.78
GSMUA_Achr3P32350_001	Banana	mitochondrion	20.07	12.06
GSMUA_Achr11P...	Banana	mitochondrion	20.39	11.99
GSMUA_AchrUn_...	Banana	plastid	19.41	11.85
GSMUA_Achr9P21250_001	Banana	plastid	18.75	11.7
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	7.24	8.09
GSMUA_Achr4P25280_001	Banana	plastid	19.41	7.69
GSMUA_Achr5P26260_001	Banana	plastid	17.43	7.66
GSMUA_Achr9P14930_001	Banana	nucleus	17.11	7.43
GSMUA_Achr6P24880_001	Banana	cytosol	4.61	4.96
VIT_01s0127g00770.t01	Wine grape	cytosol	1.32	4.4
GSMUA_Achr2P09900_001	Banana	cytosol	19.74	4.24
GSMUA_Achr3P06520_001	Banana	extracellular, nucleus, peroxisome	2.63	2.6

Protein Annotations

EnsemblPlants:GSMUA_Achr6P24900_001	EnsemblPlants:GSMUA_Achr6T24900_001	EnsemblPlantsGene:GSMUA_Achr6G24900_001	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase
InterPro:FAD/NAD-bd_sf	InterPro:IPR036188	PANTHER:PTHR10742	PANTHER:PTHR10742:SF313	PFAM:PF01593	SignalP:SignalP-noTM
SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI0002967AA7	UniProt:M0T9Y6	MapMan:50.1.5	:

Description

amine oxidase, flavin-containing, domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G24900_001]

Coordinates

chr6:+:25745278..25747253

Molecular Weight (calculated)

33257.8 Da

IEP (calculated)

4.667

GRAVY (calculated)

0.129

Length

304 amino acids

Sequence
(BLAST)

001: MGALDAIVAL LLVSNVFAGA VAAAGPKVIV VGAGMSGISA AKTLSDAGIK DILILEATDR IGGRMRKVNF AGMNVEMGAN WVEGVNGPEL NPIWKMANKL
101: HLRNFFSDYS NLSSNTYNEI GGLYQSSEVD EVIEEAAKVN SFGEKLSASL PPSGREDVSI LTSQRLKNHV PSTALEMVVD YYTYDYEFAE PPRVTSLQNT
201: VPLPTFANFG EDVYFVADQR GYESLVYDLA GQFLRTAKNG TIVDPRLLLG KVSLTIVDFS DQIYYLYILP WRVRTSIEPV FSYLITSVLY ALFDISLGRH
301: ANAL

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.