Factsheet for GSMUA_Achr6P24880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	71.28	73.9
VIT_01s0127g00770.t01	Wine grape	cytosol	21.99	68.13
GSMUA_Achr5P08640_001	Banana	cytosol, nucleus, peroxisome	57.8	36.06
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	59.93	34.14
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	59.57	33.27
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	56.74	32.72
KRH32977	Soybean	plasma membrane	48.23	27.2
KRH39911	Soybean	plasma membrane	44.68	27.1
Bra006210.1-P	Field mustard	extracellular	45.04	26.96
CDX70516	Canola	extracellular	45.04	26.96
Solyc01g087590.2.1	Tomato	vacuole	47.52	26.96
AT5G13700.1	Thale cress	extracellular	45.04	26.91
CDX78534	Canola	extracellular	45.39	26.67
PGSC0003DMT400017667	Potato	vacuole	46.81	26.67
KRH13982	Soybean	plasma membrane	46.81	26.35
GSMUA_Achr3P06520_001	Banana	extracellular, nucleus, peroxisome	20.57	18.83
KRH69303	Soybean	vacuole	21.63	15.84
GSMUA_AchrUn_...	Banana	plastid	25.53	14.46
GSMUA_Achr5P00660_001	Banana	peroxisome	24.47	14.23
GSMUA_Achr9P21250_001	Banana	plastid	24.47	14.17
GSMUA_Achr11P...	Banana	mitochondrion	24.11	13.15
GSMUA_Achr3P32350_001	Banana	mitochondrion	21.63	12.06
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.18	9.71
GSMUA_Achr5P26260_001	Banana	plastid	21.63	8.82
GSMUA_Achr4P25280_001	Banana	plastid	23.05	8.47
GSMUA_Achr9P14930_001	Banana	nucleus	20.92	8.43
GSMUA_Achr2P09900_001	Banana	cytosol	24.82	4.95
GSMUA_Achr6P24900_001	Banana	vacuole	4.96	4.61
GSMUA_Achr6P24870_001	Banana	vacuole	0.35	0.39

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.1	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G24880_001	EnsemblPlants:GSMUA_Achr6P24880_001	EnsemblPlants:GSMUA_Achr6T24880_001	InterPro:IPR036188
UniProt:M0T9Y4	PFAM:PF01593	PANTHER:PTHR10742	PANTHER:PTHR10742:SF313	SUPFAM:SSF51905	SUPFAM:SSF54373
TMHMM:TMhelix	UniParc:UPI0002967028	:	:	:	:

Description

Polyamine oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr6G24880_001]

Coordinates

chr6:+:25715603..25717014

Molecular Weight (calculated)

32845.5 Da

IEP (calculated)

9.390

GRAVY (calculated)

-0.421

Length

282 amino acids

Sequence
(BLAST)

001: MQKNKEIRED IRHSTSGVTV TIEDGSFYNA DYVIVSVSIG VLQSKLIKFK PDLPQWKNLA ICQFGMSVYT KIFLKFPHKF WPDGEGTEHF LYASERRGYY
101: PVWQHFEKQY PGANVLLVTV TDEESRRIEQ QADSRTKAEA MEVLRNMFGK HIPEATDILV PKWWSDRFFK GSFSNWPLGV NRYEYDQIRA PIGRVYFTGE
201: HTSQHYNGYV HGAYLAGIDC ANMMIKCVKY KTCEYKIKPK DSLQQNIFLY LLLTCMSLLF VTVVTYSPKV KNLGNKSHRE KK

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.