Factsheet for GSMUA_Achr6P24870_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24900_001	Banana	vacuole	79.53	66.45
GSMUA_Achr5P08640_001	Banana	cytosol, nucleus, peroxisome	57.48	32.3
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	60.24	30.91
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	57.09	29.65
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	53.15	26.73
KRH69303	Soybean	vacuole	34.25	22.6
CDX70516	Canola	extracellular	36.61	19.75
CDX78534	Canola	extracellular	37.01	19.58
Bra006210.1-P	Field mustard	extracellular	36.22	19.53
KRH39911	Soybean	plasma membrane	34.65	18.92
AT5G13700.1	Thale cress	extracellular	34.65	18.64
KRH13982	Soybean	plasma membrane	35.83	18.16
KRH32977	Soybean	plasma membrane	34.65	17.6
Solyc01g087590.2.1	Tomato	vacuole	34.25	17.5
PGSC0003DMT400017667	Potato	vacuole	33.86	17.37
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.08	12.38
GSMUA_Achr3P32350_001	Banana	mitochondrion	20.87	10.47
GSMUA_Achr5P00660_001	Banana	peroxisome	18.9	9.9
GSMUA_Achr9P21250_001	Banana	plastid	18.11	9.45
GSMUA_Achr11P...	Banana	mitochondrion	18.9	9.28
GSMUA_AchrUn_...	Banana	plastid	18.11	9.24
GSMUA_Achr4P25280_001	Banana	plastid	20.87	6.91
GSMUA_Achr5P26260_001	Banana	plastid	18.11	6.65
GSMUA_Achr9P14930_001	Banana	nucleus	16.54	6.0
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	4.72	4.41
GSMUA_Achr2P09900_001	Banana	cytosol	20.08	3.6
VIT_01s0127g00770.t01	Wine grape	cytosol	0.39	1.1
GSMUA_Achr6P24880_001	Banana	cytosol	0.39	0.35
GSMUA_Achr3P06520_001	Banana	extracellular, nucleus, peroxisome	0.0	0.0

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:50.1.5	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G24870_001	EnsemblPlants:GSMUA_Achr6P24870_001	EnsemblPlants:GSMUA_Achr6T24870_001	InterPro:IPR036188
UniProt:M0T9Y3	PFAM:PF01593	PANTHER:PTHR10742	PANTHER:PTHR10742:SF313	SUPFAM:SSF51905	TMHMM:TMhelix
UniParc:UPI00029678B8	:	:	:	:	:

Description

Polyamine oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr6G24870_001]

Coordinates

chr6:+:25706941..25710211

Molecular Weight (calculated)

27661.5 Da

IEP (calculated)

7.504

GRAVY (calculated)

0.022

Length

254 amino acids

Sequence
(BLAST)

001: MGAIDVIVAL LLISNVIVGG FAVAGPKVII VGAGMSGISA AKTLSDAGVK DILILEATDR IGGRMRKASF IGLNVEVGAN WVQGVNGLEM NPIWEMANKL
101: HMRKFISDFR NISSNTYKEN GGLYPRSKVD KVIEEADKVK SFGEKLSKSL PPSGHEDISI LASQRLKDQV PSTALEMLMD YFNCDYEFAE PPRVTSLQNT
201: IPLPTFANFG KEAYFVADQR GFESLVYDLA GQFLRTTKNS SIVDPRLLLG KVNA

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.