Factsheet for Os04t0671300-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

peroxisome: 21796433

gfp PMID: 21796433 doi

Y Ono, DW Kim, K Watanabe, A Sasaki, M Niitsu, T Berberich, T Kusano, Y Takahashi

Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba, Sendai, Miyagi, 980-8577, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G121050.1	Barley	peroxisome	93.09	93.09
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	92.89	92.89
TraesCS2A01G548100.1	Wheat	peroxisome	91.67	92.61
EES13072	Sorghum	plastid	91.26	91.45
TraesCS2B01G579000.1	Wheat	peroxisome	93.09	87.07
Zm00001d026586_P003	Maize	peroxisome, plastid	88.82	82.61
GSMUA_Achr9P21250_001	Banana	plastid	75.61	76.39
GSMUA_AchrUn_...	Banana	plastid	77.03	76.1
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	74.59	75.36
Solyc03g031880.2.1	Tomato	cytosol	68.29	70.29
PGSC0003DMT400061872	Potato	cytosol	67.89	69.87
KRG98020	Soybean	cytosol	69.31	69.17
KRH20055	Soybean	cytosol	68.7	68.56
Solyc02g081390.2.1	Tomato	cytosol	68.7	68.28
PGSC0003DMT400050770	Potato	cytosol	68.5	68.08
KRH72905	Soybean	peroxisome	68.29	68.02
VIT_04s0043g00220.t01	Wine grape	plastid	67.48	67.76
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	67.07	66.8
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	62.6	61.97
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	61.79	61.17
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	31.3	60.39
CDY16424	Canola	cytosol, peroxisome, plastid	61.38	60.04
CDY54438	Canola	cytosol, peroxisome, plastid	61.38	59.22
Os04t0623300-01	Rice	peroxisome	58.13	59.09
Os09t0368500-01	Rice	golgi	22.36	23.21
Os09t0368200-00	Rice	golgi, vacuole	23.17	22.98
Os01t0710200-01	Rice	mitochondrion	23.37	22.46
Os04t0560300-01	Rice	cytosol	33.54	20.35
Os08t0143400-01	Rice	nucleus	29.88	19.27
Os03t0193400-00	Rice	nucleus, peroxisome	7.72	18.81
Os02t0755200-01	Rice	nucleus	30.49	17.67
Os10t0532100-01	Rice	nucleus	33.33	13.58
Os04t0671100-01	Rice	cytosol, mitochondrion, plastid	0.81	2.92
Os10t0532150-00	Rice	cytosol, nucleus, plastid	0.2	0.4

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	EntrezGene:4337360	MapMan:8.5.2.2	EMBL:AK072414	InterPro:Amino_oxidase
ProteinID:BAF16133.1	ProteinID:BAS91567.1	ProteinID:EEE61884.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188
EnsemblPlantsGene:Os04g0671300	EnsemblPlants:Os04t0671300-01	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264
UniProt:Q0J954	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI00001B17A0	RefSeq:XP_015636452.1	SEG:seg

Description

POLYAMINE OXIDASE 5Polyamine oxidase, Seed germination (Os04t0671300-01)

Coordinates

chr4:-:34244273..34248323

Molecular Weight (calculated)

54189.1 Da

IEP (calculated)

5.696

GRAVY (calculated)

0.013

Length

492 amino acids

Sequence
(BLAST)

001: MDQPSNGFAA GGLFLRHIDG QNASPPSVIV IGGGISGIAA ARALSNASFK VTLLESRDRL GGRVHTDYSF GCPIDMGASW LHGVCNENSL APLIRLLGLR
101: LYRTSGDNSV LYDHDLESYA LFDKDGRQVP QEIVTKVGET FEKILKETVK VRAEHEDDMP LIQAISIVLD RNPHLKLDGL QYEVLQWCIC RLEAWFATDV
201: DNISLKNWDQ EHVLTGGHGL MVHGYDPVIK ALAQDLDIHL NHRVTKIIQR YNKTIVCVED GTSFVADAAI ITVPLGVLKA NIIKFEPELP DWKLSSISDL
301: GIGIENKIAL RFNSVFWPNV EVLGRVAPTS NACGYFLNLH KATGHPVLVC MVAGRFAYEF EKLSDEESVN FVMSQLKKML PGATEPVQYL VSRWGTDPNS
401: LGSYSCDLVG KPADLYERFC APVGNLFFAG EAACIDHSGS VHGAYSSGIV AAEDCRRHLS TQLGISDLFQ VGKIIMREEM TEVMVPFQIS RL

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.