Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94594 | Sorghum | nucleus | 69.04 | 46.36 |
| HORVU6Hr1G092910.1 | Barley | nucleus | 68.79 | 45.71 |
| TraesCS6D01G389200.1 | Wheat | nucleus | 69.54 | 45.36 |
| TraesCS6A01G405500.2 | Wheat | nucleus | 69.54 | 45.36 |
| TraesCS6B01G449900.1 | Wheat | nucleus | 69.21 | 45.29 |
| Zm00001d029714_P001 | Maize | extracellular | 67.55 | 44.98 |
| GSMUA_Achr2P09900_001 | Banana | cytosol | 43.05 | 36.75 |
| Os04t0623300-01 | Rice | peroxisome | 13.41 | 33.47 |
| PGSC0003DMT400009649 | Potato | cytosol | 35.84 | 33.41 |
| Os04t0671300-01 | Rice | peroxisome | 13.58 | 33.33 |
| Os04t0671200-01 | Rice | cytosol, peroxisome, plastid | 12.5 | 31.01 |
| CDY22771 | Canola | nucleus | 38.0 | 29.11 |
| Bra040571.1-P | Field mustard | nucleus | 37.83 | 28.94 |
| KRH17390 | Soybean | nucleus | 45.28 | 28.88 |
| CDY42542 | Canola | nucleus | 38.0 | 28.81 |
| AT4G16310.4 | Thale cress | nucleus | 38.58 | 28.62 |
| KRH05909 | Soybean | nucleus | 45.03 | 28.53 |
| Os08t0143400-01 | Rice | nucleus | 17.63 | 27.92 |
| Os04t0560300-01 | Rice | cytosol | 18.38 | 27.37 |
| Os02t0755200-01 | Rice | nucleus | 18.79 | 26.74 |
| Os01t0710200-01 | Rice | mitochondrion | 11.09 | 26.17 |
| Solyc04g081100.2.1 | Tomato | nucleus | 43.21 | 25.12 |
| Os09t0368500-01 | Rice | golgi | 9.77 | 24.89 |
| Os09t0368200-00 | Rice | golgi, vacuole | 9.85 | 23.99 |
| Os03t0193400-00 | Rice | nucleus, peroxisome | 3.15 | 18.81 |
| Os10t0532150-00 | Rice | cytosol, nucleus, plastid | 0.0 | 0.0 |
| Os04t0671100-01 | Rice | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:12.3.3.8.2 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | UniProt:A0A0P0XWY0 | InterPro:Amino_oxidase |
| ProteinID:BAT11788.1 | ncoils:Coil | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Homeobox-like_sf | InterPro:IPR007526 |
| InterPro:IPR036188 | InterPro:IPR036388 | EnsemblPlantsGene:Os10g0532100 | EnsemblPlants:Os10t0532100-01 | PFAM:PF01593 | PFAM:PF04433 |
| PRINTS:PR00419 | PFscan:PS50934 | PANTHER:PTHR10742 | PANTHER:PTHR10742:SF354 | SUPFAM:SSF46689 | SUPFAM:SSF51905 |
| SUPFAM:SSF54373 | InterPro:SWIRM | UniParc:UPI0000DD9A54 | InterPro:WH-like_DNA-bd_sf | SEG:seg | : |
Description
SWIRM domain-containing protein HDMA704, histone lysine-specific demethylase 704, polyamine oxidase 11Similar to Amine oxidase, flavin-containing. (Os10t0532100-01)
Coordinates
chr10:+:20681520..20685553
Molecular Weight (calculated)
131121.0 Da
IEP (calculated)
5.107
GRAVY (calculated)
-0.410
Length
1208 amino acids
Sequence
(BLAST)
(BLAST)
0001: IGGELKDSGG LGLEDSLSTL FKRSGRKSRQ VSVKEEEGVE VAGSHGEEIL EKGSGLVSDR VAKGTKRRRR RTKEEMKNAA AKSESAMAHE GSPNRKVGTS
0101: LPRKAKAEAK VKISNSNRRS KKSDEKPKAS DDVLCHRSLG ETIEQDAETR TVLDDGSRNS SDGASHRIEV SACLSNQPCL KPCSGELAEE VSLSAANAAT
0201: DGVSNEHTYS ETLLKERNDD AGCSHGKPPT LAIKSIPGKK PIEMPKKPVR QKDQLLSTDV DNKCVVGSGD TKDVNIENQP AFGIPESHVT GKGLHPHKMA
0301: TSVKELDVVD VVAPTDFEDM ENASKSKRVT RSSRKRKHGD MAYEGDIDWE TLMQEQGLFS NLSAALVDYP LKSKDKIKIS EVLDNGDGSG VAAVRAGLKA
0401: KAVTPIEKIK FKDILKRRGG LQEYLECRNM ILSRWCKDVK HILDLAECGV SDVCLDDESP RQTLIRDVYL FLDQNGYINA GIASDKVKTD HESPPEDVEV
0501: SKLNESHERK SVSIQDCIVT EAVQDKKAVV KQTDCVLTEA SNEESSSAAI HCDAQDLLPP LKSEELIFKE KNQGVLTEGR DESALPSNSD IHSKSDLDGF
0601: ILKVEGGSLH QAEAADIEHS ENKHEASDRV ESGGYGKKII VVGAGPAGLT AARHLQRQGF SVTVLEARNR IGGRVYTDRV SLSVPVDLGA SIITGVEADI
0701: ATERRADPSS LICSQLGLEL TVLNSACPLY DVVTGDKVPD DLDTDLESEY NGLLDEMAQL FAQNGESAVG LSLEDGLEYA LRKNRVTRSE QDDQLRNVSS
0801: AGAVDISESA STEKEIAHCG KEDKTDVLSP LERRVMNWHF AHLEYGCAAM LKSVSLPYWN QDDVYGGFGG AHCMIKGGYD TVLESLAKGL DVQLNHVVTE
0901: VLYGSEELGA SGNSRKFVKI STSNGNEFVG DAVLITVPLG CLKAQTIKFS PSLPDWKLSS IDRLGFGLLN KIVLEFPEVF WDDNVDYFGA TAEQTDLRGQ
1001: CFMFWNLKKT VGVPVLIALL VGKAAIDGQS ISSDDHVKNA IVVLRKLFKD ASVPDPVASV VTNWGLDPFS RGAYSYVAVG ASGRDYDILG RPVSDCLFFA
1101: GEATCKEHPD TVGGAILSGL REAVRIIDLV HSGKDYVAEV EALQTYQMQS DSERNEVKDM SNKLDACELS TALCKTSSDA SYPLFSKETL LQEMFFSAKT
1201: TSGRLHLA
0101: LPRKAKAEAK VKISNSNRRS KKSDEKPKAS DDVLCHRSLG ETIEQDAETR TVLDDGSRNS SDGASHRIEV SACLSNQPCL KPCSGELAEE VSLSAANAAT
0201: DGVSNEHTYS ETLLKERNDD AGCSHGKPPT LAIKSIPGKK PIEMPKKPVR QKDQLLSTDV DNKCVVGSGD TKDVNIENQP AFGIPESHVT GKGLHPHKMA
0301: TSVKELDVVD VVAPTDFEDM ENASKSKRVT RSSRKRKHGD MAYEGDIDWE TLMQEQGLFS NLSAALVDYP LKSKDKIKIS EVLDNGDGSG VAAVRAGLKA
0401: KAVTPIEKIK FKDILKRRGG LQEYLECRNM ILSRWCKDVK HILDLAECGV SDVCLDDESP RQTLIRDVYL FLDQNGYINA GIASDKVKTD HESPPEDVEV
0501: SKLNESHERK SVSIQDCIVT EAVQDKKAVV KQTDCVLTEA SNEESSSAAI HCDAQDLLPP LKSEELIFKE KNQGVLTEGR DESALPSNSD IHSKSDLDGF
0601: ILKVEGGSLH QAEAADIEHS ENKHEASDRV ESGGYGKKII VVGAGPAGLT AARHLQRQGF SVTVLEARNR IGGRVYTDRV SLSVPVDLGA SIITGVEADI
0701: ATERRADPSS LICSQLGLEL TVLNSACPLY DVVTGDKVPD DLDTDLESEY NGLLDEMAQL FAQNGESAVG LSLEDGLEYA LRKNRVTRSE QDDQLRNVSS
0801: AGAVDISESA STEKEIAHCG KEDKTDVLSP LERRVMNWHF AHLEYGCAAM LKSVSLPYWN QDDVYGGFGG AHCMIKGGYD TVLESLAKGL DVQLNHVVTE
0901: VLYGSEELGA SGNSRKFVKI STSNGNEFVG DAVLITVPLG CLKAQTIKFS PSLPDWKLSS IDRLGFGLLN KIVLEFPEVF WDDNVDYFGA TAEQTDLRGQ
1001: CFMFWNLKKT VGVPVLIALL VGKAAIDGQS ISSDDHVKNA IVVLRKLFKD ASVPDPVASV VTNWGLDPFS RGAYSYVAVG ASGRDYDILG RPVSDCLFFA
1101: GEATCKEHPD TVGGAILSGL REAVRIIDLV HSGKDYVAEV EALQTYQMQS DSERNEVKDM SNKLDACELS TALCKTSSDA SYPLFSKETL LQEMFFSAKT
1201: TSGRLHLA
0001: MDGKEKKSGS KRGSKVFQFD DDADDDEPIG SLLEIMKHKS SKKDKVETES TGKQRQKQVV EKKLSALGKD SEDMDDTLAS FRKRLKGNKK GVESGTSRVR
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
Arabidopsis Description
LDL3Lysine-specific histone demethylase 1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JLS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.