Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22771 | Canola | nucleus | 96.74 | 97.72 |
| AT4G16310.4 | Thale cress | nucleus | 82.36 | 80.59 |
| PGSC0003DMT400009649 | Potato | cytosol | 44.07 | 54.17 |
| GSMUA_Achr2P09900_001 | Banana | cytosol | 44.13 | 49.68 |
| Os10t0532150-00 | Rice | cytosol, nucleus, plastid | 7.03 | 45.16 |
| KRH17390 | Soybean | nucleus | 52.17 | 43.88 |
| KRH05909 | Soybean | nucleus | 51.6 | 43.1 |
| Solyc04g081100.2.1 | Tomato | nucleus | 50.91 | 39.03 |
| EER94594 | Sorghum | nucleus | 43.63 | 38.63 |
| TraesCS6B01G449900.1 | Wheat | nucleus | 44.44 | 38.35 |
| TraesCS6D01G389200.1 | Wheat | nucleus | 44.51 | 38.28 |
| TraesCS6A01G405500.2 | Wheat | nucleus | 44.44 | 38.23 |
| Zm00001d029714_P001 | Maize | extracellular | 43.5 | 38.2 |
| Os10t0532100-01 | Rice | nucleus | 28.81 | 38.0 |
| HORVU6Hr1G092910.1 | Barley | nucleus | 42.69 | 37.4 |
| CDY42808 | Canola | peroxisome | 10.67 | 35.42 |
| CDY55139 | Canola | endoplasmic reticulum, extracellular | 12.87 | 35.22 |
| CDX83508 | Canola | peroxisome | 10.61 | 35.21 |
| CDY55500 | Canola | peroxisome | 10.67 | 34.69 |
| CDY14867 | Canola | peroxisome | 10.61 | 34.49 |
| CDY53655 | Canola | peroxisome | 10.55 | 34.29 |
| CDY30376 | Canola | peroxisome | 10.55 | 34.29 |
| CDY55136 | Canola | cytosol | 15.57 | 33.93 |
| CDY51731 | Canola | cytosol | 15.51 | 33.74 |
| CDX67773 | Canola | peroxisome | 10.36 | 33.74 |
| CDY16424 | Canola | cytosol, peroxisome, plastid | 10.61 | 33.6 |
| CDY54438 | Canola | cytosol, peroxisome, plastid | 10.67 | 33.33 |
| CDY46926 | Canola | cytosol | 13.68 | 31.23 |
| CDY31848 | Canola | nucleus | 13.68 | 31.1 |
| CDX98346 | Canola | cytosol | 10.61 | 30.78 |
| CDY00667 | Canola | cytosol, plastid | 16.01 | 27.9 |
| CDX73929 | Canola | nucleus, plastid | 15.94 | 27.55 |
| CDY54281 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 8.16 | 26.53 |
| CDY30206 | Canola | mitochondrion | 8.16 | 25.84 |
| CDY43522 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 7.78 | 25.0 |
| CDY06780 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 8.16 | 24.07 |
| CDX70516 | Canola | extracellular | 6.72 | 22.72 |
| CDX78534 | Canola | extracellular | 6.84 | 22.71 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:12.3.3.8.2 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | GO:A0A078HXJ9 | UniProt:A0A078HXJ9 |
| InterPro:Amino_oxidase | EnsemblPlants:CDY42542 | ProteinID:CDY42542 | ProteinID:CDY42542.1 | ncoils:Coil | InterPro:FAD/NAD-bd_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00075005001 | InterPro:Homeobox-like_sf |
| InterPro:IPR007526 | InterPro:IPR035441 | InterPro:IPR036188 | InterPro:IPR036388 | PFAM:PF01593 | PFAM:PF04433 |
| PRINTS:PR00419 | PFscan:PS50934 | PANTHER:PTHR10742 | PANTHER:PTHR10742:SF354 | SUPFAM:SSF46689 | SUPFAM:SSF47676 |
| SUPFAM:SSF51905 | SUPFAM:SSF54373 | InterPro:SWIRM | InterPro:TFIIS/LEDGF_dom_sf | UniParc:UPI0004EF0E7C | InterPro:WH-like_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g10610DBnaC08g10610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXJ9]
Coordinates
chrLK032528:-:55021..61809
Molecular Weight (calculated)
175641.0 Da
IEP (calculated)
6.871
GRAVY (calculated)
-0.532
Length
1593 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGKGKKCGS KKESKVFDFE DDDEPIGSLL KVMKHKTATK SKVETETTGK QRQKGAVEKK LTHVRKDSED MDDTLASFRK RLKGHKKRVR NDKDVPPVDT
0101: VTDSNLIPSP DMADDASELG REGTVNKKSL DDIYKTKVKS STRSVTLEKE ADADDKSKRP LPNVDVYPPV DRKDVSVPSP DQHIHLGEPE SESGHFREEK
0201: IVMCDCGIQF NFEDRSLDSN SEVAICQKCK RSSHRDASNG GGIQVNTLKD GTAEASPVSV TPYEDEDFRG DAVSLPNSGK PSTLQRPERI ARKRKHENMV
0301: YGEDMNWENE QGFLDCQSDK SFKGSDKCDF GPFISKEFEI GRAAAVAAGL KAQSVSPVEK TILKEVLKRK GSHQEYLRCR NSILGLWSKN VSRILPVTEC
0401: VVGHSESEFP SAGLIREVYK FLDQRGYINT GVSSVRGKGG PSTNHDDDLS QGKKLEESSM ASVANSDGDT FIFGQVKAVE STSEGKNCAL QNDETEIVEC
0501: ATSAMLGSTR KTCEASIIDD CKHSVSINAL LADANAPKVE KCPETISVRK TVLSSTLSSA NCDQMRGRDC VQGEVEDEKK VIVIGAGPAG LTAARHLQRQ
0601: GFSVTVLEAR SRVGGRVYTD RSSLSVPVDL GASIITGIEA DVPSERMPDP SALVCNQLGL ELSVLHGFCP LYDTVTGEKV PPELDDALQG EFNSLIDDMD
0701: LLVEEIGKDR ANKMSLEDGL EYGLQRLRMP HEKVNIERFG IGNSINGSFS RTGITGTFKH DGRLKKDFLN PLERRVMNWH FAHTEYGCAA VLKEVSLSNW
0801: NQDEFYGGFG GPHAMIKGGY SRVAESLAEG LDIRLNNVVS EVSYTSDVSA MHNNKHKVIV STSNGGEYLG DAVLVTVPLG CLKAETIKFS PPLPDWKYSS
0901: IKQLGFGVLN KVVLEFSKVF WDDSLDYFGA TAEETDQRGE CFMFWNVKKT VGAPVLIALV VGKAAVDYKD KSKSEHVNHA MMVLRKLFGG DLVPDPVASV
1001: VTDWGADPYS YGAYSYVAIG ASGEDYDVLG RPVQNCLFFA GEATCKEHPD TVGGAMMTGV REAVRIIDIL RSGNDYTAEI ETLEKAQRKS VSIRDEVSDL
1101: IKRLEVVELS NVLARHSLLR NMFFSAKTTV GRLHLAKELL NLPGETLKSF AGTKEGLTVL NSWILDSMGK NGTQLLRHCV HILVRVTSDL FAVRLSGIGK
1201: TVKEKVCAHT SRDIRAIASQ LVNVWLELYR KEKANREMKS LRRTNPTNIS RIRRKQNSED ADSKGNLSNG NDTTTDGEIE DNQLPMSEEE KAVFATAEAA
1301: RVAAEAAAKA NVSAYQSTSL QLPKIPSFHK FARREQYAKM DESDFKKKFP GNVLGRQDCM SEIDSRNCKV RDWYDFPASC LDPDSSRVQV DNCSQRSHSN
1401: ELGSHSKFRE CSRESGAAET SVFTGAWVDT GGSSDGGKDY KAIDRWQSQA AAADPEFFNR ALHMKDEEGS MACSTGPPSW KHDQPANEGS MSQVTVNKEP
1501: RKSHIRGADR LKQGVVDFVA SLLMTPYRAK KIDRDVYKSI MKKTATKVMQ QTTDAEKAMA VPQFLDSKRK NKIRDFVDKQ VDKYIAMAKV AKP
0101: VTDSNLIPSP DMADDASELG REGTVNKKSL DDIYKTKVKS STRSVTLEKE ADADDKSKRP LPNVDVYPPV DRKDVSVPSP DQHIHLGEPE SESGHFREEK
0201: IVMCDCGIQF NFEDRSLDSN SEVAICQKCK RSSHRDASNG GGIQVNTLKD GTAEASPVSV TPYEDEDFRG DAVSLPNSGK PSTLQRPERI ARKRKHENMV
0301: YGEDMNWENE QGFLDCQSDK SFKGSDKCDF GPFISKEFEI GRAAAVAAGL KAQSVSPVEK TILKEVLKRK GSHQEYLRCR NSILGLWSKN VSRILPVTEC
0401: VVGHSESEFP SAGLIREVYK FLDQRGYINT GVSSVRGKGG PSTNHDDDLS QGKKLEESSM ASVANSDGDT FIFGQVKAVE STSEGKNCAL QNDETEIVEC
0501: ATSAMLGSTR KTCEASIIDD CKHSVSINAL LADANAPKVE KCPETISVRK TVLSSTLSSA NCDQMRGRDC VQGEVEDEKK VIVIGAGPAG LTAARHLQRQ
0601: GFSVTVLEAR SRVGGRVYTD RSSLSVPVDL GASIITGIEA DVPSERMPDP SALVCNQLGL ELSVLHGFCP LYDTVTGEKV PPELDDALQG EFNSLIDDMD
0701: LLVEEIGKDR ANKMSLEDGL EYGLQRLRMP HEKVNIERFG IGNSINGSFS RTGITGTFKH DGRLKKDFLN PLERRVMNWH FAHTEYGCAA VLKEVSLSNW
0801: NQDEFYGGFG GPHAMIKGGY SRVAESLAEG LDIRLNNVVS EVSYTSDVSA MHNNKHKVIV STSNGGEYLG DAVLVTVPLG CLKAETIKFS PPLPDWKYSS
0901: IKQLGFGVLN KVVLEFSKVF WDDSLDYFGA TAEETDQRGE CFMFWNVKKT VGAPVLIALV VGKAAVDYKD KSKSEHVNHA MMVLRKLFGG DLVPDPVASV
1001: VTDWGADPYS YGAYSYVAIG ASGEDYDVLG RPVQNCLFFA GEATCKEHPD TVGGAMMTGV REAVRIIDIL RSGNDYTAEI ETLEKAQRKS VSIRDEVSDL
1101: IKRLEVVELS NVLARHSLLR NMFFSAKTTV GRLHLAKELL NLPGETLKSF AGTKEGLTVL NSWILDSMGK NGTQLLRHCV HILVRVTSDL FAVRLSGIGK
1201: TVKEKVCAHT SRDIRAIASQ LVNVWLELYR KEKANREMKS LRRTNPTNIS RIRRKQNSED ADSKGNLSNG NDTTTDGEIE DNQLPMSEEE KAVFATAEAA
1301: RVAAEAAAKA NVSAYQSTSL QLPKIPSFHK FARREQYAKM DESDFKKKFP GNVLGRQDCM SEIDSRNCKV RDWYDFPASC LDPDSSRVQV DNCSQRSHSN
1401: ELGSHSKFRE CSRESGAAET SVFTGAWVDT GGSSDGGKDY KAIDRWQSQA AAADPEFFNR ALHMKDEEGS MACSTGPPSW KHDQPANEGS MSQVTVNKEP
1501: RKSHIRGADR LKQGVVDFVA SLLMTPYRAK KIDRDVYKSI MKKTATKVMQ QTTDAEKAMA VPQFLDSKRK NKIRDFVDKQ VDKYIAMAKV AKP
0001: MDGKEKKSGS KRGSKVFQFD DDADDDEPIG SLLEIMKHKS SKKDKVETES TGKQRQKQVV EKKLSALGKD SEDMDDTLAS FRKRLKGNKK GVESGTSRVR
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
Arabidopsis Description
LDL3Lysine-specific histone demethylase 1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JLS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.