CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000284.1-P	Field mustard	cytosol	98.12	98.12
CDY42808	Canola	peroxisome	96.88	96.88
CDY55500	Canola	peroxisome	89.79	87.96
CDY53655	Canola	peroxisome	89.38	87.55
CDY14867	Canola	peroxisome	89.38	87.55
CDY30376	Canola	peroxisome	88.96	87.14
AT2G43020.1	Thale cress	peroxisome	88.96	87.14
CDX67773	Canola	peroxisome	80.0	78.53
VIT_12s0028g01120.t01	Wine grape	cytosol	77.29	75.71
KRH73583	Soybean	cytosol, peroxisome, plastid	76.04	74.95
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	76.46	74.9
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	76.25	74.85
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	75.83	74.29
Solyc12g006370.1.1	Tomato	plastid	74.38	73.16
PGSC0003DMT400074125	Potato	plastid	74.17	72.95
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	74.17	72.65
KRG99036	Soybean	plasma membrane, vacuole	74.38	71.69
CDX98346	Canola	cytosol	79.58	69.58
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	69.38	68.8
Os04t0623300-01	Rice	peroxisome	69.38	68.8
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	69.17	68.74
TraesCS2A01G467300.1	Wheat	peroxisome	69.17	68.59
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	69.17	68.59
Zm00001d002266_P003	Maize	peroxisome	68.75	68.32
Zm00001d026334_P001	Maize	peroxisome	68.54	68.26
GSMUA_Achr5P00660_001	Banana	peroxisome	68.75	68.04
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	64.58	65.68
GSMUA_Achr11P...	Banana	mitochondrion	68.54	63.64
CDY16424	Canola	cytosol, peroxisome, plastid	59.58	56.86
CDY54438	Canola	cytosol, peroxisome, plastid	59.38	55.88
CDY55139	Canola	endoplasmic reticulum, extracellular	32.08	26.46
CDX70516	Canola	extracellular	25.21	25.69
CDX78534	Canola	extracellular	25.0	25.0
CDY30206	Canola	mitochondrion	23.75	22.66
CDY54281	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	22.92	22.45
CDY43522	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	22.71	21.98
CDY55136	Canola	cytosol	33.33	21.89
CDY51731	Canola	cytosol	32.92	21.58
CDY46926	Canola	cytosol	31.25	21.49
CDY31848	Canola	nucleus	31.25	21.4
CDY06780	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	23.54	20.93
CDX73929	Canola	nucleus, plastid	30.83	16.05
CDY00667	Canola	cytosol, plastid	30.42	15.97
CDY22771	Canola	nucleus	35.21	10.72
CDY42542	Canola	nucleus	35.21	10.61

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	GO:A0A078D8A2	InterPro:Amino_oxidase	EnsemblPlants:CDX83508
ProteinID:CDX83508	ProteinID:CDX83508.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00139102001	InterPro:IPR036188
PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	SUPFAM:SSF51905	SUPFAM:SSF54373
UniParc:UPI0004EE2871	:	:	:	:	:

Description

BnaA03g19980D

Coordinates

chrLK031832:-:1857210..1859734

Molecular Weight (calculated)

52860.5 Da

IEP (calculated)

6.382

GRAVY (calculated)

-0.094

Length

480 amino acids

Sequence
(BLAST)

001: MESRKNSDHR QMRRGGESMK TRSPSVIVVG SGFAGISAAR TLQDASFQVT VLESRDRIGG RVHTDYSFGF PVDLGASWLH GVCKENPLAP VIGRLGLPLY
101: RTSGDNSVLY DHDLESYALF DMGGNQVPKE LVREVGVTFK QILEEVKKVR DEQDADMSIS QAFSIVFSKK PELKLEGLAH NVLQWYLCRM EGWFAADADT
201: ISVQCWDQEE LLPGGHGLMV RGYRPVINTL AKGLDIRLNH RVTKTVRQYN GVKVTTEDGK TFVADAAVIA VPLGVLKSGT ITFEPKLPDW KQEAINQLGV
301: GIMNKIILHF EKVFWPQVEL LGVAAETSYG CSYFLNLHKA TGHPVLVYMS AGQLAKDIEK MSDEAAASFA LMQLQRIFPN AMAPVQYLVS RWGSDVNSLG
401: SYSYDAVGKP HDLSERLRVP VDNLFFAGEA TSSSFAGSVH GAYSSGQMAA EECMMRVLDL FQLVMGEEGP ASVPLLISRL

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.