CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67773	Canola	peroxisome	88.16	98.98
Bra003362.1-P	Field mustard	cytosol	87.61	98.36
AT3G59050.1	Thale cress	cytosol, nucleus, peroxisome	81.79	92.01
CDY14867	Canola	peroxisome	74.68	83.67
CDY30376	Canola	peroxisome	74.5	83.47
CDY55500	Canola	peroxisome	74.5	83.47
CDY53655	Canola	peroxisome	74.13	83.06
CDY42808	Canola	peroxisome	69.76	79.79
CDX83508	Canola	peroxisome	69.58	79.58
VIT_12s0028g01120.t01	Wine grape	cytosol	68.31	76.53
KRH73583	Soybean	cytosol, peroxisome, plastid	67.76	76.39
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	67.94	76.28
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	67.58	75.71
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	67.21	75.31
PGSC0003DMT400074125	Potato	plastid	66.85	75.2
Solyc12g006370.1.1	Tomato	plastid	66.67	75.0
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	66.85	74.9
KRG99036	Soybean	plasma membrane, vacuole	67.76	74.7
GSMUA_Achr5P00660_001	Banana	peroxisome	63.39	71.75
Os04t0623300-01	Rice	peroxisome	63.02	71.49
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	62.84	71.43
Zm00001d002266_P003	Maize	peroxisome	62.66	71.22
TraesCS2A01G467300.1	Wheat	peroxisome	62.3	70.66
Zm00001d026334_P001	Maize	peroxisome	61.93	70.54
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	62.11	70.45
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	61.93	70.25
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	58.47	68.01
GSMUA_Achr11P...	Banana	mitochondrion	61.57	65.38
CDY16424	Canola	cytosol, peroxisome, plastid	52.46	57.26
CDY54438	Canola	cytosol, peroxisome, plastid	52.46	56.47
CDY55139	Canola	endoplasmic reticulum, extracellular	27.14	25.6
CDX70516	Canola	extracellular	21.86	25.48
CDX78534	Canola	extracellular	21.86	25.0
CDY30206	Canola	mitochondrion	20.04	21.87
CDY54281	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	19.49	21.84
CDY55136	Canola	cytosol	28.78	21.61
CDY43522	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	19.31	21.37
CDY51731	Canola	cytosol	28.42	21.31
CDY46926	Canola	cytosol	26.59	20.92
CDY31848	Canola	nucleus	26.59	20.83
CDY06780	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	20.04	20.37
CDX73929	Canola	nucleus, plastid	27.14	16.16
CDY00667	Canola	cytosol, plastid	26.78	16.08
CDY22771	Canola	nucleus	30.78	10.72
CDY42542	Canola	nucleus	30.78	10.61

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	GO:A0A078EAX4	InterPro:Amino_oxidase	EnsemblPlants:CDX98346
ProteinID:CDX98346	ProteinID:CDX98346.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00105897001	InterPro:IPR036188
PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	SUPFAM:SSF51905	SUPFAM:SSF54373
UniParc:UPI0004EE49DA	SEG:seg	:	:	:	:

Description

BnaC06g17070D

Coordinates

chrLK031904:-:703083..706601

Molecular Weight (calculated)

61445.8 Da

IEP (calculated)

7.155

GRAVY (calculated)

-0.239

Length

549 amino acids

Sequence
(BLAST)

001: MASEGKTDPQ LNKDTSVSTL ERMKKKRTPS VIVIGAGMAG IAAARTLQDA SFQVVLLESR DRIGGRVHTD YSFGFPVDLG ASWLHGVCKE NPLAAVIGRL
101: GLPLYRTSGD NSVLYDHDLE SYALFDKAGN QVPQELVTKV GETFEHILEE ICKVRDEQVE DMSISQAFSI VFKRSPELRL EGIAHNVLQW YLCRMEGWFA
201: ADAETISAKC WDQEELLPGG HGLMVRGYRP IINTLSKGLD IRLNHRVTKI ARRYNGVKVT TEKGDTFAAD AAVIALPLGV LKSGTIEFEP KLPDWKQEAI
301: NDLGVGIENK IILNFDNVFW PNVEFLGVVA ETSYGCSYFL NLHKATNHPV LVYMPAGQLA RDIEKMSDES AVKFAFSQLQ KILPDASSPI HYLVSRWGSD
401: INSLGSYSYD IVNKPHDLYE RLRVPLDNLF FAGEATSTSY PGSVHGAYST GLLAAEDCRM RVLERYGELE HEIEEEAPAS VPLLISRIQR KLQNNIINVG
501: VKIQNRFRVV CMGMLATRKF LQKRRKIRGF QRCSRRGGSE EMERANVRD

Best Arabidopsis Sequence Match ( AT3G59050.1 )
(BLAST)

001: MESGGKTNRQ LRKAICVSTD EKMKKKRSPS VIVIGGGMAG ISAARTLQDA SFQVVVLESR DRIGGRVHTD YSFGFPVDLG ASWLHGVCKE NPLAAVIGRL
101: GLPLYRTSGD NSVLYDHDLE SYALFDKAGN QVSQELVTKV GENFEHILEE ICKVRDEQDE DMSIAQAFSI VFKRNPELRL EGLAHNVLQW YLCRMEGWFA
201: ADAETISAKC WDQEELLPGG HGLMVRGYRP VINTLSKGLD IRLSHRITKI SRRYSGVKVT TEKGDTFVAD AAVIALPLGV LKSGMITFEP KLPQWKQEAI
301: NDLGVGIENK IILNFDNVFW PNVEFLGVVA ETSYGCSYFL NLHKATSHPV LVYMPAGQLA RDIEKKSDEA AANFAFSQLQ KILPDASSPI NYLVSRWGSD
401: INSLGSYSYD IVNKPHDLYE RLRVPLDNLF FAGEATSSSY PGSVHGAYST GVLAAEDCRM RVLERYGELE HEMEEEAPAS VPLLISRM

Arabidopsis Description

PAO3Polyamine oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.