Factsheet for Zm00001d002266_P003

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026334_P001	Maize	peroxisome	96.48	96.68
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	96.48	96.48
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	91.1	93.22
Os04t0623300-01	Rice	peroxisome	91.72	91.53
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	90.48	90.29
TraesCS2A01G467300.1	Wheat	peroxisome	90.27	90.08
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	90.27	90.08
GSMUA_Achr5P00660_001	Banana	peroxisome	75.16	74.85
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	73.08	72.04
KRH73583	Soybean	cytosol, peroxisome, plastid	72.46	71.87
VIT_12s0028g01120.t01	Wine grape	cytosol	72.88	71.84
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	72.67	71.63
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	72.46	71.57
GSMUA_Achr11P...	Banana	mitochondrion	76.4	71.37
Bra037741.1-P	Field mustard	peroxisome	71.22	70.93
Solyc12g006370.1.1	Tomato	plastid	71.64	70.9
CDX67773	Canola	peroxisome	71.64	70.76
Bra003362.1-P	Field mustard	cytosol	71.64	70.76
PGSC0003DMT400074125	Potato	plastid	71.43	70.7
CDY14867	Canola	peroxisome	71.43	70.41
Bra004737.1-P	Field mustard	peroxisome	71.22	70.2
CDY55500	Canola	peroxisome	71.22	70.2
CDY30376	Canola	peroxisome	71.22	70.2
AT3G59050.1	Thale cress	cytosol, nucleus, peroxisome	70.81	70.08
AT2G43020.1	Thale cress	peroxisome	71.01	70.0
CDY53655	Canola	peroxisome	70.81	69.8
CDY42808	Canola	peroxisome	68.74	69.17
CDX83508	Canola	peroxisome	68.32	68.75
Bra000284.1-P	Field mustard	cytosol	68.12	68.54
KRG99036	Soybean	plasma membrane, vacuole	70.19	68.07
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	67.91	66.94
CDX98346	Canola	cytosol	71.22	62.66
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	58.39	57.55
Zm00001d026586_P003	Maize	peroxisome, plastid	58.18	53.12
Zm00001d024281_P001	Maize	extracellular	26.71	25.8
Zm00001d028172_P001	Maize	cytosol	18.01	23.51
Zm00001d043681_P001	Maize	mitochondrion	22.36	21.43
Zm00001d024647_P001	Maize	mitochondrion	31.47	19.92
Zm00001d002684_P001	Maize	extracellular	30.23	18.07
Zm00001d018102_P001	Maize	nucleus	29.61	16.84
Zm00001d029714_P001	Maize	extracellular	34.99	9.32

Protein Annotations

EntrezGene:101027113	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	UniProt:A0A1D6DYV6	InterPro:Amino_oxidase
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0016491	GO:GO:0016740	GO:GO:0032259	GO:GO:0055114	InterPro:IPR036188
ProteinID:ONM13742.1	ProteinID:ONM13745.1	ProteinID:ONM13753.1	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742
PANTHER:PTHR10742:SF264	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI000220FE45	EnsemblPlantsGene:Zm00001d002266	EnsemblPlants:Zm00001d002266_P003
EnsemblPlants:Zm00001d002266_T003	SEG:seg	:	:	:	:

Description

Lysine-specific histone demethylase 1

Coordinates

chr2:+:9167395..9172599

Molecular Weight (calculated)

53583.3 Da

IEP (calculated)

6.165

GRAVY (calculated)

-0.115

Length

483 amino acids

Sequence
(BLAST)

001: MANNSSYGEN ARRKPHTPSA IVIGGGFAGL AAADALRNAS FQVILLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCEEN PLAPIIGRLG LPLYRTSGDD
101: SVLFDHDLES YALYDTNGRQ VPQELVEKLG KVFEKILEET GKLREEINED MSIAKAIAIV MARNPHLRQE GIAHEVLQWY LCRMEGWFAT DADSISLQGW
201: DQEVLLPGGH GLMVRGYRPV INTLAKGLDI RLNHKVVEIV RHRNRVEVTV SSGQTFVADA AVVTVPLGVL KAKTIKFEPR LPEWKEEAIR ELTVGVENKI
301: VLHFGQVFWP NVEFLGVVSS STYGCSYFLN LHKATGHPVL VYMPAGRLAR DIEKTSDEAA AQFAFSQLKK ILPNAAEPIN YLVSRWGSDE NTLGSYTFDG
401: VNKPRDLYEK LRIPVDNLFF AGEATSVKYT GTVHGAFSTG VMAAEECKMR VLERFRELDM LEMCHPAMGE DSPVSVPLLI SRL

Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)

001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Arabidopsis Description

PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.