CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
peroxisome 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99036	Soybean	plasma membrane, vacuole	91.02	89.56
KRH73583	Soybean	cytosol, peroxisome, plastid	82.65	83.16
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	82.04	82.21
VIT_12s0028g01120.t01	Wine grape	cytosol	79.18	79.18
Bra037741.1-P	Field mustard	peroxisome	77.55	78.35
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	78.16	78.16
CDY30376	Canola	peroxisome	77.96	77.96
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	77.55	77.55
CDY14867	Canola	peroxisome	77.55	77.55
CDY55500	Canola	peroxisome	77.55	77.55
Bra004737.1-P	Field mustard	peroxisome	77.35	77.35
CDY53655	Canola	peroxisome	77.35	77.35
AT2G43020.1	Thale cress	peroxisome	76.73	76.73
PGSC0003DMT400074125	Potato	plastid	75.51	75.82
Solyc12g006370.1.1	Tomato	plastid	75.51	75.82
AT3G59050.1	Thale cress	cytosol, nucleus, peroxisome	75.1	75.41
CDX67773	Canola	peroxisome	74.9	75.05
Bra003362.1-P	Field mustard	cytosol	74.69	74.85
CDY42808	Canola	peroxisome	72.86	74.38
CDX83508	Canola	peroxisome	72.65	74.17
Bra000284.1-P	Field mustard	cytosol	71.84	73.33
GSMUA_Achr5P00660_001	Banana	peroxisome	69.59	70.31
Os04t0623300-01	Rice	peroxisome	68.57	69.42
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	67.76	68.59
TraesCS2A01G467300.1	Wheat	peroxisome	67.76	68.59
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	67.55	68.39
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	67.14	68.12
Zm00001d002266_P003	Maize	peroxisome	66.94	67.91
Zm00001d026334_P001	Maize	peroxisome	66.73	67.84
CDX98346	Canola	cytosol	74.9	66.85
GSMUA_Achr11P...	Banana	mitochondrion	69.18	65.57
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	63.06	65.47
KRH20055	Soybean	cytosol	62.04	61.66
KRG98020	Soybean	cytosol	61.63	61.26
KRH72905	Soybean	peroxisome	59.18	58.7
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	58.98	58.5
KRH39911	Soybean	plasma membrane	23.47	24.73
KRH48463	Soybean	cytosol, peroxisome	17.55	23.56
KRH32977	Soybean	plasma membrane	23.67	23.2
KRH13982	Soybean	plasma membrane	23.47	22.95
KRH02713	Soybean	golgi	22.86	21.13
KRH55370	Soybean	nucleus	31.63	20.86
KRH19156	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.86	20.82
KRH12386	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	23.06	19.45
KRH37387	Soybean	golgi	23.27	19.0
KRH69303	Soybean	vacuole	14.9	18.96
KRH39215	Soybean	nucleus	31.84	18.59
KRH71619	Soybean	cytosol	31.63	17.69
KRH48462	Soybean	nucleus, plastid	11.84	15.76
KRH17390	Soybean	nucleus	34.9	9.03
KRH05909	Soybean	nucleus	34.69	8.91

Protein Annotations

EntrezGene:100799631	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	EMBL:ACUP02005298	InterPro:Amino_oxidase
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	EnsemblPlantsGene:GLYMA_08G303800	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:I1KXW2	InterPro:IPR036188	EnsemblPlants:KRH45972
ProteinID:KRH45972	ProteinID:KRH45972.1	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264
SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI00023389CB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:42173590..42178597

Molecular Weight (calculated)

54151.1 Da

IEP (calculated)

5.673

GRAVY (calculated)

-0.077

Length

490 amino acids

Sequence
(BLAST)

001: MESRTKSNPQ LTRALCYAND GNQQGRSPSV IVIGGGMAGI AAARSLHDAS LQVVLLESRE RIGGRIHTDY SFGFPVDMGA SWLHGVSNEN PLASVIGRLG
101: LPLYRTSGDN SILYDHDLES YGLFDMDGKQ VPQELVAKVG EIFEAILQET DKIRQESSED MSVLRGLSIV FDRKPELRLE GIAYKVLQWY LCRLEGWFAA
201: DTDAISLKGW DQEVLLPGGH GLMVRGYLPV VNSLAKGLDI RLGHRVTKVV RRYNGVKVTV ENGKTFFADA AVIAVPLGVL KAKKILFEPK LPDWKEAAIA
301: DLGIGLENKI ILHFENVFWP NVEFLGVVAD TPYECSYFLN LHKATGRAVL VYMPSGQLAK DVEKMPDEAA VNFAFMQLKK IFPDASSPIQ YLVSRWGSDI
401: NSLGSYSYDA VGKPHELYER LRVPVDNLFF AGEATSMSYP GSVHGAYSTG TMAAEDCRMR VLERYGEVDL FQPVMGEEGS MSIPLQISRL

Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)

001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Arabidopsis Description

PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.