CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55500	Canola	peroxisome	99.39	99.39
Bra004737.1-P	Field mustard	peroxisome	99.18	99.18
CDY30376	Canola	peroxisome	97.76	97.76
CDY14867	Canola	peroxisome	97.55	97.55
AT2G43020.1	Thale cress	peroxisome	96.33	96.33
CDY42808	Canola	peroxisome	87.76	89.58
CDX83508	Canola	peroxisome	87.55	89.38
CDX67773	Canola	peroxisome	83.47	83.64
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	80.61	80.61
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	80.0	80.0
KRH73583	Soybean	cytosol, peroxisome, plastid	78.98	79.47
VIT_12s0028g01120.t01	Wine grape	cytosol	79.18	79.18
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	78.78	78.94
Solyc12g006370.1.1	Tomato	plastid	78.16	78.48
PGSC0003DMT400074125	Potato	plastid	78.16	78.48
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	77.35	77.35
KRG99036	Soybean	plasma membrane, vacuole	77.76	76.51
CDX98346	Canola	cytosol	83.06	74.13
GSMUA_Achr5P00660_001	Banana	peroxisome	71.22	71.96
Os04t0623300-01	Rice	peroxisome	70.61	71.49
TraesCS2A01G467300.1	Wheat	peroxisome	70.2	71.07
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	70.2	71.07
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	70.0	70.87
Zm00001d002266_P003	Maize	peroxisome	69.8	70.81
Zm00001d026334_P001	Maize	peroxisome	69.59	70.75
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	69.59	70.6
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	65.51	68.01
GSMUA_Achr11P...	Banana	mitochondrion	70.0	66.34
CDY16424	Canola	cytosol, peroxisome, plastid	60.0	58.45
CDY54438	Canola	cytosol, peroxisome, plastid	60.0	57.65
CDY55139	Canola	endoplasmic reticulum, extracellular	31.22	26.29
CDX70516	Canola	extracellular	24.29	25.27
CDX78534	Canola	extracellular	24.49	25.0
CDY30206	Canola	mitochondrion	22.65	22.07
CDY54281	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	22.04	22.04
CDY55136	Canola	cytosol	32.65	21.89
CDY51731	Canola	cytosol	32.24	21.58
CDY43522	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	21.84	21.57
CDY46926	Canola	cytosol	30.41	21.35
CDY31848	Canola	nucleus	30.41	21.26
CDY06780	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	22.65	20.56
CDX73929	Canola	nucleus, plastid	30.2	16.05
CDY00667	Canola	cytosol, plastid	29.8	15.97
CDY22771	Canola	nucleus	34.29	10.65
CDY42542	Canola	nucleus	34.29	10.55

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	GO:A0A078IRH4	UniProt:A0A078IRH4	InterPro:Amino_oxidase
EnsemblPlants:CDY53655	ProteinID:CDY53655	ProteinID:CDY53655.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00011139001
InterPro:IPR036188	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	SUPFAM:SSF51905
SUPFAM:SSF54373	UniParc:UPI0004EDF760	:	:	:	:

Description

BnaC04g52890DBnaC04g52890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRH4]

Coordinates

chrLK033224:+:27389..30846

Molecular Weight (calculated)

54196.0 Da

IEP (calculated)

5.493

GRAVY (calculated)

-0.102

Length

490 amino acids

Sequence
(BLAST)

001: MESRKNSDRQ MRRANCFSAG GRMKTRSPSV VVIGGGFAGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLE
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTNVG ITFEQILEEI NKVRDEQDAD MSISQAFSIV FSRKPELRLE GLAHNVLQWY LCRMEGWFAA
201: DADTISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGIDI RLGHRVTKIV RRYNGVKVTT ENGETFVADA AVIAVPLGVL KSGTITFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ CLVSRWGSDV
401: NSLGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAGEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)

001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Arabidopsis Description

PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.