CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43522	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	89.26	97.18
Bra011132.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	95.74	95.56
CDY30206	Canola	mitochondrion	79.07	84.89
CDY54281	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	76.85	84.69
AT4G29720.1	Thale cress	mitochondrion	83.52	84.62
VIT_11s0016g02180.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	61.11	63.58
KRH02713	Soybean	golgi	59.44	60.57
Solyc05g018880.1.1	Tomato	endoplasmic reticulum	57.22	60.35
PGSC0003DMT400055123	Potato	cytosol	57.59	59.81
KRH19156	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.07	59.29
Solyc07g039310.1.1	Tomato	golgi	55.0	57.89
KRH12386	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	62.04	57.66
PGSC0003DMT400045965	Potato	endoplasmic reticulum	55.37	57.5
KRH37387	Soybean	golgi	61.85	55.67
PGSC0003DMT400094539	Potato	golgi	53.15	53.15
Solyc03g007160.1.1	Tomato	plasma membrane, vacuole	17.96	52.43
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.26	51.46
GSMUA_Achr3P32350_001	Banana	mitochondrion	46.48	49.6
TraesCS3D01G251100.1	Wheat	golgi	41.85	46.03
TraesCS3B01G280200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	43.15	45.96
Os01t0710200-01	Rice	mitochondrion	43.52	45.9
EES03507	Sorghum	mitochondrion	43.52	45.63
HORVU3Hr1G066920.4	Barley	extracellular	43.15	45.16
TraesCS3A01G250700.1	Wheat	mitochondrion	42.41	44.9
Zm00001d043681_P001	Maize	mitochondrion	40.93	43.85
Solyc12g008850.1.1	Tomato	cytosol	50.93	40.92
PGSC0003DMT400000891	Potato	endoplasmic reticulum	51.3	34.58
CDX83508	Canola	peroxisome	20.93	23.54
CDY42808	Canola	peroxisome	20.93	23.54
CDY55500	Canola	peroxisome	20.74	22.86
CDX67773	Canola	peroxisome	20.56	22.7
CDY53655	Canola	peroxisome	20.56	22.65
CDY16424	Canola	cytosol, peroxisome, plastid	20.93	22.47
CDY30376	Canola	peroxisome	20.19	22.24
CDY14867	Canola	peroxisome	20.19	22.24
CDY54438	Canola	cytosol, peroxisome, plastid	20.74	21.96
CDY55139	Canola	endoplasmic reticulum, extracellular	23.52	21.82
CDX70516	Canola	extracellular	18.7	21.44
CDX78534	Canola	extracellular	18.7	21.04
CDX98346	Canola	cytosol	20.37	20.04
CDY46926	Canola	cytosol	23.7	18.34
CDY31848	Canola	nucleus	23.7	18.26
CDY55136	Canola	cytosol	23.52	17.37
CDY51731	Canola	cytosol	23.52	17.35
CDX73929	Canola	nucleus, plastid	24.07	14.1
CDY00667	Canola	cytosol, plastid	23.7	14.0
CDY22771	Canola	nucleus	24.07	8.24
CDY42542	Canola	nucleus	24.07	8.16

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.3	GO:A0A078EXI3	InterPro:Amino_oxidase	EnsemblPlants:CDY06780
ProteinID:CDY06780	ProteinID:CDY06780.1	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00123013001	InterPro:IPR036188	PFAM:PF01593
PANTHER:PTHR10742	PANTHER:PTHR10742:SF320	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI0004EF4CE4	SEG:seg

Description

BnaC01g08790D

Coordinates

chrLK031973:+:209094..210752

Molecular Weight (calculated)

59510.1 Da

IEP (calculated)

4.901

GRAVY (calculated)

-0.277

Length

540 amino acids

Sequence
(BLAST)

001: MAKKPRIVII GAGMAGLTAA NKLYTHSNNA FDLSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP IYKIAEETGS LVSEEPWECM DSTVDKARTF
101: AEGGFEIELP IVESVSGLFN ALMELAQGKE IDDDGGDLGE NYEIATRFYS SVNGPNGSSV GSFLRSGFEA YWASVSKAEN GVEGCGTWSR RSLEEAIFTM
201: FSNTQRTYTS ADDLYTLDYV AESEYQMFPG EEITIAKGYL SVIHHLASVL PQGVVELNRR VVKIEWESNE EDPVKLHFSD GSVVFADHVI VTVSLGVLKA
301: GIESDGWLFS PPLPEFKSDA IKRLGYGVVN KLFVEVSQRR FPSLQLVFEK EDSEYRFVKI PWWMRRTATI APIHSNSKVL LSWFAGKEAL ELEKLTDEEI
401: IDGVLTTVSC LTGKEVKKDN GKAPKTFTNG SLREDDDEEV VKITKVLTSK WGGDPLFRGS YSYVAVGSSG DDLDAMAEPL PQINKKSGQV NGHGQAKVHE
501: LQVMFAGEAT HRTHYSTTHG AYYSGLREAN RLLKHYKCDF

Best Arabidopsis Sequence Match ( AT4G29720.1 )
(BLAST)

001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF

Arabidopsis Description

PAO5Probable polyamine oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU79]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.