Factsheet for VIT_11s0016g02180.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plasma membrane, golgi

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02713	Soybean	golgi	72.25	70.75
KRH19156	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	71.87	69.33
Solyc05g018880.1.1	Tomato	endoplasmic reticulum	67.44	68.36
PGSC0003DMT400055123	Potato	cytosol	67.82	67.69
KRH12386	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	74.95	66.95
Solyc07g039310.1.1	Tomato	golgi	65.51	66.28
PGSC0003DMT400045965	Potato	endoplasmic reticulum	65.32	65.19
KRH37387	Soybean	golgi	74.95	64.83
CDY43522	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	61.66	64.52
AT4G29720.1	Thale cress	mitochondrion	63.78	62.1
CDY54281	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	58.57	62.04
CDY30206	Canola	mitochondrion	59.92	61.83
Bra011132.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	64.35	61.74
Bra024137.1-P	Field mustard	mitochondrion	60.69	61.16
CDY06780	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	63.58	61.11
Solyc03g007160.1.1	Tomato	plasma membrane, vacuole	20.23	56.76
PGSC0003DMT400094539	Potato	golgi	58.0	55.74
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.77	53.88
GSMUA_Achr3P32350_001	Banana	mitochondrion	50.29	51.58
TraesCS3D01G251100.1	Wheat	golgi	46.24	48.88
TraesCS3B01G280200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	47.4	48.52
Os01t0710200-01	Rice	mitochondrion	47.21	47.85
EES03507	Sorghum	mitochondrion	47.4	47.77
TraesCS3A01G250700.1	Wheat	mitochondrion	46.63	47.45
HORVU3Hr1G066920.4	Barley	extracellular	46.63	46.9
Zm00001d043681_P001	Maize	mitochondrion	45.09	46.43
Solyc12g008850.1.1	Tomato	cytosol	58.38	45.09
PGSC0003DMT400000891	Potato	endoplasmic reticulum	58.57	37.95
VIT_12s0028g01120.t01	Wine grape	cytosol	22.54	23.88
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	21.97	23.31
VIT_04s0043g00220.t01	Wine grape	plastid	21.58	22.86
VIT_01s0127g00770.t01	Wine grape	cytosol	3.85	21.98
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	20.81	21.82
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	20.62	21.19
VIT_13s0064g00390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	20.04	20.68
VIT_03s0017g01000.t01	Wine grape	nucleus	25.05	19.2
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	8.86	18.04
VIT_19s0014g03430.t01	Wine grape	cytosol	26.2	18.01
VIT_13s0019g04820.t01	Wine grape	nucleus	24.66	12.48
VIT_18s0001g13650.t01	Wine grape	nucleus	8.29	3.67
VIT_18s0001g13640.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	0.19	0.19

Protein Annotations

EntrezGene:100243887	wikigene:100243887	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.3	InterPro:Amino_oxidase
ProteinID:CCB51444	ProteinID:CCB51444.1	UniProt:F6HGW1	InterPro:FAD/NAD-bd_sf	EMBL:FN595756	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188
EntrezGene:LOC100243887	wikigene:LOC100243887	PFAM:PF01593	PANTHER:PTHR10742	PANTHER:PTHR10742:SF320	SUPFAM:SSF51905
SUPFAM:SSF54373	UniParc:UPI00021081F3	ArrayExpress:VIT_11s0016g02180	EnsemblPlantsGene:VIT_11s0016g02180	EnsemblPlants:VIT_11s0016g02180.t01	RefSeq:XP_002279603
RefSeq:XP_002279603.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:+:1791548..1793453

Molecular Weight (calculated)

57146.3 Da

IEP (calculated)

6.204

GRAVY (calculated)

-0.179

Length

519 amino acids

Sequence
(BLAST)

001: MVAKKPRIVI IGAGMAGLTA ANKLYTSTGF KDLFELCVVE GGTRIGGRIN TSQFGGDRIE MGATWIHGIV GSPIHKMAQE LHSLESDQPW ECMDGYLDSP
101: TTMAEGGFEL GPSTVDPVST LFKKLMDFSQ GKLIEDSVCS EELSVGTFLR RGLDAYWASV KDREEIKGYG NWSRKLLEEA IFAMHESTQR TYTSAGDLST
201: LDYDAESEYI MFPGEEVTIA KGYLSIIEAL ASVLPAGLIQ LGREVTKIEW QPECHRSVEV ENGYGSRPVK LHFCDGSTMS ADHVIVTVSL GVLKAGICGD
301: SGLFNPPLPS FKTEAISRLG YGVVNKLFVQ LSPSHDHEGK KLNKFPFLQM VFHRSDSELR HQKIPWWMRR TASVCPIYNN SSVLLSWFAG KEALELEKMK
401: DEEILNGVSV TVTSLLSNEV KFIKVLKSKW GTDPLFRGSY SYVGVGSSGE DLDSMAKPLP ESSKSGANAC PPLQILFAGE ATHRTHYSTT HGAYFSGLRE
501: ANRLLQHYNC VGVSELLQH

Best Arabidopsis Sequence Match ( AT4G29720.1 )
(BLAST)

001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF

Arabidopsis Description

PAO5Probable polyamine oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU79]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.