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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • peroxisome 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, peroxisome, secretory
iPSORT:secretory
MultiLoc:peroxisome
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G280200.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 89.34 90.93
TraesCS3D01G251100.1 Wheat golgi 86.05 90.43
TraesCS3A01G250700.1 Wheat mitochondrion 88.37 89.41
Os01t0710200-01 Rice mitochondrion 77.13 77.73
Zm00001d043681_P001 Maize mitochondrion 75.0 76.79
EES03507 Sorghum mitochondrion 75.97 76.12
GSMUA_Achr4P15860_001 Banana endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 44.96 56.31
GSMUA_Achr3P32350_001 Banana mitochondrion 53.88 54.94
CDY54281 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 44.57 46.94
Solyc05g018880.1.1 Tomato endoplasmic reticulum 46.32 46.68
VIT_11s0016g02180.t01 Wine grape endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 46.9 46.63
CDY43522 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 44.57 46.37
KRH02713 Soybean golgi 47.09 45.85
PGSC0003DMT400055123 Potato cytosol 45.93 45.58
CDY30206 Canola mitochondrion 44.19 45.33
KRH19156 Soybean endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 47.09 45.17
Bra024137.1-P Field mustard mitochondrion 44.77 44.85
PGSC0003DMT400045965 Potato endoplasmic reticulum 45.16 44.81
Solyc07g039310.1.1 Tomato golgi 44.19 44.44
Bra011132.1-P Field mustard endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 45.35 43.25
CDY06780 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 45.16 43.15
KRH12386 Soybean endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 48.06 42.69
AT4G29720.1 Thale cress mitochondrion 43.99 42.59
KRH37387 Soybean golgi 47.87 41.17
Solyc03g007160.1.1 Tomato plasma membrane, vacuole 14.73 41.08
PGSC0003DMT400094539 Potato golgi 40.7 38.89
Solyc12g008850.1.1 Tomato cytosol 42.44 32.59
PGSC0003DMT400000891 Potato endoplasmic reticulum 42.25 27.22
HORVU1Hr1G057320.1 Barley extracellular, peroxisome 5.23 24.55
HORVU2Hr1G121050.1 Barley peroxisome 21.51 22.56
HORVU2Hr1G121060.1 Barley plastid 21.32 22.49
HORVU7Hr1G118260.1 Barley plasma membrane, vacuole 21.51 22.29
HORVU7Hr1G090410.1 Barley vacuole 21.51 22.07
HORVU7Hr1G118240.1 Barley endoplasmic reticulum, golgi, vacuole 20.93 21.82
HORVU6Hr1G091060.1 Barley cytosol 17.83 21.15
HORVU7Hr1G073020.3 Barley cytosol, mitochondrion, peroxisome 26.94 19.2
HORVU6Hr1G042330.1 Barley cytosol 13.76 18.98
HORVU4Hr1G071450.1 Barley mitochondrion 19.96 18.13
HORVU6Hr1G078160.1 Barley plastid 26.55 15.69
HORVU2Hr1G096300.1 Barley plastid 13.18 14.95
HORVU6Hr1G092910.1 Barley nucleus 25.78 7.32
HORVU1Hr1G057290.1 Barley cytosol 0.19 0.78
Protein Annotations
Gene3D:3.50.50.60Gene3D:3.90.660.10MapMan:8.5.2.3UniProt:A0A287LFZ0InterPro:Amino_oxidaseInterPro:FAD/NAD-bd_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0048510GO:GO:0055114GO:GO:1990534
EnsemblPlantsGene:HORVU3Hr1G066920EnsemblPlants:HORVU3Hr1G066920.4InterPro:IPR036188PFAM:PF01593PANTHER:PTHR10742PANTHER:PTHR10742:SF320
SUPFAM:SSF51905SUPFAM:SSF54373UniParc:UPI000B46DF64SEG:seg::
Description
No Description!
Coordinates
chrchr3H:+:508333994..508335638
Molecular Weight (calculated)
55628.1 Da
IEP (calculated)
5.512
GRAVY (calculated)
-0.174
Length
516 amino acids
Sequence
(BLAST)
001: MVEKKPRIVI VGAGIAGLSA AQQLCGAGRE KFEVVVVEAG CRAGGRVFTS EFADHRLEMG ATWVQGILGS PVYALAREAG ALREEAADLP YERMDGFPDG
101: VLTVAEGGGV VDANTVAKPI EELYRGMMEA ARAGEAVGEG GGVEEYLRRG LRAYQARRPG GRKELEEVEE ALLGMHINRE RTDTSADDLG DLDLPAEGEY
201: RDFPGDHVTI PGGYTRVVEH LVAALPPGTV RLGLRLRRLD WGETPVRLHF AGEATTTLTA DHVILTVSLG VLKASIGKDV SATATGAIAF DPPLPQFKRE
301: AVERLGFGVV DKLFIEVEAV ETPEPDGGYA QLARTAQPAF PFLHMAFLGD AAKIPWWMRG TESVCPVHAG STVALAWFAG REAAHLESLP DDEVISALQS
401: TLESFLPAQP RRCSWAGAGA TPRWRVKRIK RSGWAADPLF LGSYSYVAVG SSGEDLDRMA EPLPRGPEAD RTPLRVLFAG EATHRTHYST THAAYLSGVR
501: EADRLLQHYS HFRGSG
Best Arabidopsis Sequence Match ( AT4G29720.1 )
(BLAST)
001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF
Arabidopsis Description
PAO5Probable polyamine oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU79]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.