Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G206700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 96.82 | 92.24 |
TraesCS7D01G303200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 96.55 | 92.09 |
TraesCS7A01G306400.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 96.55 | 92.09 |
Os08t0143400-01 | Rice | nucleus | 81.08 | 76.93 |
Zm00001d024647_P001 | Maize | mitochondrion | 79.83 | 75.75 |
EES14528 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 79.28 | 75.43 |
HORVU1Hr1G057320.1 | Barley | extracellular, peroxisome | 9.67 | 63.64 |
CDY55139 | Canola | endoplasmic reticulum, extracellular | 47.51 | 59.11 |
GSMUA_Achr5P26260_001 | Banana | plastid | 56.49 | 59.1 |
VIT_19s0014g03430.t01 | Wine grape | cytosol | 57.6 | 55.23 |
Bra021500.1-P | Field mustard | cytosol | 55.25 | 54.72 |
CDY51731 | Canola | cytosol | 55.25 | 54.64 |
CDY55136 | Canola | cytosol | 55.11 | 54.58 |
AT3G13682.1 | Thale cress | cytosol | 56.08 | 54.42 |
KRH55370 | Soybean | nucleus | 54.97 | 53.57 |
PGSC0003DMT400049658 | Potato | cytosol | 55.11 | 52.57 |
Solyc07g063500.2.1 | Tomato | cytosol, mitochondrion, nucleus | 53.59 | 51.39 |
Solyc07g063450.1.1 | Tomato | cytosol | 54.83 | 43.39 |
HORVU6Hr1G078160.1 | Barley | plastid | 47.79 | 39.63 |
HORVU2Hr1G096300.1 | Barley | plastid | 24.86 | 39.56 |
HORVU2Hr1G121060.1 | Barley | plastid | 21.27 | 31.49 |
HORVU2Hr1G121050.1 | Barley | peroxisome | 21.13 | 31.1 |
HORVU3Hr1G066920.4 | Barley | extracellular | 19.2 | 26.94 |
HORVU7Hr1G090410.1 | Barley | vacuole | 16.44 | 23.66 |
HORVU6Hr1G042330.1 | Barley | cytosol | 12.15 | 23.53 |
HORVU7Hr1G118260.1 | Barley | plasma membrane, vacuole | 15.47 | 22.49 |
HORVU7Hr1G118240.1 | Barley | endoplasmic reticulum, golgi, vacuole | 15.19 | 22.22 |
HORVU1Hr1G057290.1 | Barley | cytosol | 3.87 | 21.71 |
HORVU6Hr1G091060.1 | Barley | cytosol | 12.71 | 21.15 |
HORVU4Hr1G071450.1 | Barley | mitochondrion | 16.02 | 20.42 |
HORVU6Hr1G092910.1 | Barley | nucleus | 32.6 | 12.98 |
Protein Annotations
Gene3D:1.10.10.10 | MapMan:12.3.3.8.1 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | UniProt:A0A287WV65 | InterPro:Amino_oxidase |
ncoils:Coil | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016043 | GO:GO:0016491 | GO:GO:0019538 | GO:GO:0051568 | GO:GO:0055114 | EnsemblPlantsGene:HORVU7Hr1G073020 |
EnsemblPlants:HORVU7Hr1G073020.3 | InterPro:Homeobox-like_sf | InterPro:IPR007526 | InterPro:IPR036188 | InterPro:IPR036388 | PFAM:PF01593 |
PFAM:PF04433 | PFscan:PS50934 | PANTHER:PTHR10742 | PANTHER:PTHR10742:SF347 | SUPFAM:SSF46689 | SUPFAM:SSF51905 |
SUPFAM:SSF54373 | InterPro:SWIRM | UniParc:UPI000B47A47D | InterPro:WH-like_DNA-bd_sf | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:+:411366997..411370531
Molecular Weight (calculated)
79148.5 Da
IEP (calculated)
6.434
GRAVY (calculated)
-0.157
Length
724 amino acids
Sequence
(BLAST)
(BLAST)
001: LGNSPSRRIR RLRRLSPEER QRETETEALI ALSLGFPIDA LLPAEEAILA DPDAAAPNDY IVVRNHILAS WRADPRVPLP RARVLETVAS SYDHLVAAAH
101: GFLTREGHIN FGVSATFPAS PPADALHVPA ASVLVIGAGL AGLAAARQLL RFGLRVLVLE GRARPGGRVY TSRLGGGQAA VELGGSVITG IHANPLGVLA
201: RQLGIPLHKV RDRCPLYHTD GRTVGTRLDR SIDLVFNTLL DHATRLRESL KEAAEGISLG EAIERLRRLY NAAKSEEERE VLDWHLANLE FSNAGCLSEL
301: SLAYWDQDDQ FEMGGDHCFL AGGNSRLVHA LCDGVPVLYE KTVKRIEHGV DGVSITVEGG QVFQADMALC TVPLGVLKSG SIVFDPQLPE NKLGAIQRLG
401: FGLLNKVAMV FPSVFWDEEI DTFGCLNKET SKRGEFFLFY SYHTVSGGAV LVALVAGEAA LEFEKVDPVV TLHRVLGILR GIYGPKGITV PDPIQSACTR
501: WGSDPLCCGS YSHIRVGSSG TDYDILAESV SEDRLFFAGE ATNRAYPATM HGALLSGLRE ASRILRASES RVDSDHKKYA LQKSLRPPDG ILEDLFTEPD
601: LQFSRFSFVF SSMTPDDPQS MGLLRITLEN PRLEGDQKNQ ESAAEKEAHQ KAFHLYAAVS REQASQLQLA GDDDRGRLEL LCKDLSVKLM GYDNTCDTGN
701: SLILSIQSAQ KARKRQQRPK DFKF
101: GFLTREGHIN FGVSATFPAS PPADALHVPA ASVLVIGAGL AGLAAARQLL RFGLRVLVLE GRARPGGRVY TSRLGGGQAA VELGGSVITG IHANPLGVLA
201: RQLGIPLHKV RDRCPLYHTD GRTVGTRLDR SIDLVFNTLL DHATRLRESL KEAAEGISLG EAIERLRRLY NAAKSEEERE VLDWHLANLE FSNAGCLSEL
301: SLAYWDQDDQ FEMGGDHCFL AGGNSRLVHA LCDGVPVLYE KTVKRIEHGV DGVSITVEGG QVFQADMALC TVPLGVLKSG SIVFDPQLPE NKLGAIQRLG
401: FGLLNKVAMV FPSVFWDEEI DTFGCLNKET SKRGEFFLFY SYHTVSGGAV LVALVAGEAA LEFEKVDPVV TLHRVLGILR GIYGPKGITV PDPIQSACTR
501: WGSDPLCCGS YSHIRVGSSG TDYDILAESV SEDRLFFAGE ATNRAYPATM HGALLSGLRE ASRILRASES RVDSDHKKYA LQKSLRPPDG ILEDLFTEPD
601: LQFSRFSFVF SSMTPDDPQS MGLLRITLEN PRLEGDQKNQ ESAAEKEAHQ KAFHLYAAVS REQASQLQLA GDDDRGRLEL LCKDLSVKLM GYDNTCDTGN
701: SLILSIQSAQ KARKRQQRPK DFKF
001: MNSPASDETA PRRNRRKVSR KNYDENAMDE LIEKQLGGKA KKKYRTKQDL EKETETEALI ALSVGFPIDE LLEEEIRAGV VRELGGKEQN DYIVVRNHIV
101: ARWRGNVGIW LLKDQIRETV SSDFEHLISA AYDFLLFNGY INFGVSPLFA PYIPEEGTEG SVIVVGAGLA GLAAARQLLS FGFKVLVLEG RSRPGGRVYT
201: QKMGGKDRFA AVELGGSVIT GLHANPLGVL ARQLSIPLHK VRDNCPLYNS EGVLVDKVAD SNVEFGFNKL LDKVTEVREM MEGAAKKISL GEVLETLRVL
301: YGVAKDSEER KLFDWHLANL EYANAGCLSN LSAAYWDQDD PYEMGGDHCF LAGGNWRLIN ALAEGLPIIY GKSVDTIKYG DGGVEVISGS QIFQADMILC
401: TVPLGVLKKR SIKFEPELPR RKQAAIDRLG FGLLNKVAML FPSVFWGDEL DTFGCLNESS INRGEFFLFY AYHTVSGGPA LVALVAGEAA QRFECTEPSV
501: LLHRVLKKLR GIYGPKGVVV PDPIQTVCTR WGSDPLSYGS YSHVRVGSSG VDYDILAESV SNRLFFAGEA TTRQHPATMH GAYLSGLREA SKILHVANYL
601: RSNLKKPVQR YSGVNINVLE DMFKRPDIAI GKLSFVFNPL TDDPKSFGLV RVCFDNFEED PTNRLQLYTI LSREQANKIK ELDENSNESK LSCLMNTLGL
701: KLMGANSVLD TGGALISVIA NARRGRSRSH VVAGQCNLPL NPLHFN
101: ARWRGNVGIW LLKDQIRETV SSDFEHLISA AYDFLLFNGY INFGVSPLFA PYIPEEGTEG SVIVVGAGLA GLAAARQLLS FGFKVLVLEG RSRPGGRVYT
201: QKMGGKDRFA AVELGGSVIT GLHANPLGVL ARQLSIPLHK VRDNCPLYNS EGVLVDKVAD SNVEFGFNKL LDKVTEVREM MEGAAKKISL GEVLETLRVL
301: YGVAKDSEER KLFDWHLANL EYANAGCLSN LSAAYWDQDD PYEMGGDHCF LAGGNWRLIN ALAEGLPIIY GKSVDTIKYG DGGVEVISGS QIFQADMILC
401: TVPLGVLKKR SIKFEPELPR RKQAAIDRLG FGLLNKVAML FPSVFWGDEL DTFGCLNESS INRGEFFLFY AYHTVSGGPA LVALVAGEAA QRFECTEPSV
501: LLHRVLKKLR GIYGPKGVVV PDPIQTVCTR WGSDPLSYGS YSHVRVGSSG VDYDILAESV SNRLFFAGEA TTRQHPATMH GAYLSGLREA SKILHVANYL
601: RSNLKKPVQR YSGVNINVLE DMFKRPDIAI GKLSFVFNPL TDDPKSFGLV RVCFDNFEED PTNRLQLYTI LSREQANKIK ELDENSNESK LSCLMNTLGL
701: KLMGANSVLD TGGALISVIA NARRGRSRSH VVAGQCNLPL NPLHFN
Arabidopsis Description
LDL2Lysine-specific histone demethylase 1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.