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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G206700.1 Wheat cytosol, nucleus, plasma membrane, plastid 96.82 92.24
TraesCS7D01G303200.1 Wheat cytosol, nucleus, plasma membrane, plastid 96.55 92.09
TraesCS7A01G306400.1 Wheat cytosol, nucleus, plasma membrane, plastid 96.55 92.09
Os08t0143400-01 Rice nucleus 81.08 76.93
Zm00001d024647_P001 Maize mitochondrion 79.83 75.75
EES14528 Sorghum mitochondrion, nucleus, plasma membrane, plastid 79.28 75.43
HORVU1Hr1G057320.1 Barley extracellular, peroxisome 9.67 63.64
CDY55139 Canola endoplasmic reticulum, extracellular 47.51 59.11
GSMUA_Achr5P26260_001 Banana plastid 56.49 59.1
VIT_19s0014g03430.t01 Wine grape cytosol 57.6 55.23
Bra021500.1-P Field mustard cytosol 55.25 54.72
CDY51731 Canola cytosol 55.25 54.64
CDY55136 Canola cytosol 55.11 54.58
AT3G13682.1 Thale cress cytosol 56.08 54.42
KRH55370 Soybean nucleus 54.97 53.57
PGSC0003DMT400049658 Potato cytosol 55.11 52.57
Solyc07g063500.2.1 Tomato cytosol, mitochondrion, nucleus 53.59 51.39
Solyc07g063450.1.1 Tomato cytosol 54.83 43.39
HORVU6Hr1G078160.1 Barley plastid 47.79 39.63
HORVU2Hr1G096300.1 Barley plastid 24.86 39.56
HORVU2Hr1G121060.1 Barley plastid 21.27 31.49
HORVU2Hr1G121050.1 Barley peroxisome 21.13 31.1
HORVU3Hr1G066920.4 Barley extracellular 19.2 26.94
HORVU7Hr1G090410.1 Barley vacuole 16.44 23.66
HORVU6Hr1G042330.1 Barley cytosol 12.15 23.53
HORVU7Hr1G118260.1 Barley plasma membrane, vacuole 15.47 22.49
HORVU7Hr1G118240.1 Barley endoplasmic reticulum, golgi, vacuole 15.19 22.22
HORVU1Hr1G057290.1 Barley cytosol 3.87 21.71
HORVU6Hr1G091060.1 Barley cytosol 12.71 21.15
HORVU4Hr1G071450.1 Barley mitochondrion 16.02 20.42
HORVU6Hr1G092910.1 Barley nucleus 32.6 12.98
Protein Annotations
Gene3D:1.10.10.10MapMan:12.3.3.8.1Gene3D:3.50.50.60Gene3D:3.90.660.10UniProt:A0A287WV65InterPro:Amino_oxidase
ncoils:CoilInterPro:FAD/NAD-bd_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016043GO:GO:0016491GO:GO:0019538GO:GO:0051568GO:GO:0055114EnsemblPlantsGene:HORVU7Hr1G073020
EnsemblPlants:HORVU7Hr1G073020.3InterPro:Homeobox-like_sfInterPro:IPR007526InterPro:IPR036188InterPro:IPR036388PFAM:PF01593
PFAM:PF04433PFscan:PS50934PANTHER:PTHR10742PANTHER:PTHR10742:SF347SUPFAM:SSF46689SUPFAM:SSF51905
SUPFAM:SSF54373InterPro:SWIRMUniParc:UPI000B47A47DInterPro:WH-like_DNA-bd_sfSEG:seg:
Description
No Description!
Coordinates
chrchr7H:+:411366997..411370531
Molecular Weight (calculated)
79148.5 Da
IEP (calculated)
6.434
GRAVY (calculated)
-0.157
Length
724 amino acids
Sequence
(BLAST)
001: LGNSPSRRIR RLRRLSPEER QRETETEALI ALSLGFPIDA LLPAEEAILA DPDAAAPNDY IVVRNHILAS WRADPRVPLP RARVLETVAS SYDHLVAAAH
101: GFLTREGHIN FGVSATFPAS PPADALHVPA ASVLVIGAGL AGLAAARQLL RFGLRVLVLE GRARPGGRVY TSRLGGGQAA VELGGSVITG IHANPLGVLA
201: RQLGIPLHKV RDRCPLYHTD GRTVGTRLDR SIDLVFNTLL DHATRLRESL KEAAEGISLG EAIERLRRLY NAAKSEEERE VLDWHLANLE FSNAGCLSEL
301: SLAYWDQDDQ FEMGGDHCFL AGGNSRLVHA LCDGVPVLYE KTVKRIEHGV DGVSITVEGG QVFQADMALC TVPLGVLKSG SIVFDPQLPE NKLGAIQRLG
401: FGLLNKVAMV FPSVFWDEEI DTFGCLNKET SKRGEFFLFY SYHTVSGGAV LVALVAGEAA LEFEKVDPVV TLHRVLGILR GIYGPKGITV PDPIQSACTR
501: WGSDPLCCGS YSHIRVGSSG TDYDILAESV SEDRLFFAGE ATNRAYPATM HGALLSGLRE ASRILRASES RVDSDHKKYA LQKSLRPPDG ILEDLFTEPD
601: LQFSRFSFVF SSMTPDDPQS MGLLRITLEN PRLEGDQKNQ ESAAEKEAHQ KAFHLYAAVS REQASQLQLA GDDDRGRLEL LCKDLSVKLM GYDNTCDTGN
701: SLILSIQSAQ KARKRQQRPK DFKF
Best Arabidopsis Sequence Match ( AT3G13682.1 )
(BLAST)
001: MNSPASDETA PRRNRRKVSR KNYDENAMDE LIEKQLGGKA KKKYRTKQDL EKETETEALI ALSVGFPIDE LLEEEIRAGV VRELGGKEQN DYIVVRNHIV
101: ARWRGNVGIW LLKDQIRETV SSDFEHLISA AYDFLLFNGY INFGVSPLFA PYIPEEGTEG SVIVVGAGLA GLAAARQLLS FGFKVLVLEG RSRPGGRVYT
201: QKMGGKDRFA AVELGGSVIT GLHANPLGVL ARQLSIPLHK VRDNCPLYNS EGVLVDKVAD SNVEFGFNKL LDKVTEVREM MEGAAKKISL GEVLETLRVL
301: YGVAKDSEER KLFDWHLANL EYANAGCLSN LSAAYWDQDD PYEMGGDHCF LAGGNWRLIN ALAEGLPIIY GKSVDTIKYG DGGVEVISGS QIFQADMILC
401: TVPLGVLKKR SIKFEPELPR RKQAAIDRLG FGLLNKVAML FPSVFWGDEL DTFGCLNESS INRGEFFLFY AYHTVSGGPA LVALVAGEAA QRFECTEPSV
501: LLHRVLKKLR GIYGPKGVVV PDPIQTVCTR WGSDPLSYGS YSHVRVGSSG VDYDILAESV SNRLFFAGEA TTRQHPATMH GAYLSGLREA SKILHVANYL
601: RSNLKKPVQR YSGVNINVLE DMFKRPDIAI GKLSFVFNPL TDDPKSFGLV RVCFDNFEED PTNRLQLYTI LSREQANKIK ELDENSNESK LSCLMNTLGL
701: KLMGANSVLD TGGALISVIA NARRGRSRSH VVAGQCNLPL NPLHFN
Arabidopsis Description
LDL2Lysine-specific histone demethylase 1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.