Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G389200.1 | Wheat | nucleus | 93.12 | 91.41 |
| TraesCS6A01G405500.2 | Wheat | nucleus | 93.07 | 91.36 |
| TraesCS6B01G449900.1 | Wheat | nucleus | 92.52 | 91.12 |
| Os10t0532150-00 | Rice | cytosol, nucleus, plastid | 10.84 | 79.44 |
| Os10t0532100-01 | Rice | nucleus | 45.71 | 68.79 |
| EER94594 | Sorghum | nucleus | 63.15 | 63.81 |
| Zm00001d029714_P001 | Maize | extracellular | 62.87 | 63.01 |
| GSMUA_Achr2P09900_001 | Banana | cytosol | 43.4 | 55.76 |
| PGSC0003DMT400009649 | Potato | cytosol | 36.8 | 51.62 |
| CDY22771 | Canola | nucleus | 37.29 | 42.99 |
| HORVU1Hr1G057320.1 | Barley | extracellular, peroxisome | 2.59 | 42.73 |
| CDY42542 | Canola | nucleus | 37.4 | 42.69 |
| Bra040571.1-P | Field mustard | nucleus | 37.07 | 42.69 |
| AT4G16310.4 | Thale cress | nucleus | 37.79 | 42.2 |
| KRH17390 | Soybean | nucleus | 43.18 | 41.45 |
| KRH05909 | Soybean | nucleus | 43.18 | 41.16 |
| Solyc04g081100.2.1 | Tomato | nucleus | 41.8 | 36.57 |
| HORVU2Hr1G121050.1 | Barley | peroxisome | 9.02 | 33.33 |
| HORVU7Hr1G073020.3 | Barley | cytosol, mitochondrion, peroxisome | 12.98 | 32.6 |
| HORVU2Hr1G121060.1 | Barley | plastid | 8.75 | 32.52 |
| HORVU2Hr1G096300.1 | Barley | plastid | 7.37 | 29.45 |
| HORVU6Hr1G078160.1 | Barley | plastid | 13.59 | 28.29 |
| HORVU3Hr1G066920.4 | Barley | extracellular | 7.32 | 25.78 |
| HORVU7Hr1G118240.1 | Barley | endoplasmic reticulum, golgi, vacuole | 6.93 | 25.45 |
| HORVU7Hr1G118260.1 | Barley | plasma membrane, vacuole | 6.88 | 25.1 |
| HORVU6Hr1G091060.1 | Barley | cytosol | 5.83 | 24.37 |
| HORVU7Hr1G090410.1 | Barley | vacuole | 6.71 | 24.25 |
| HORVU6Hr1G042330.1 | Barley | cytosol | 4.9 | 23.8 |
| HORVU4Hr1G071450.1 | Barley | mitochondrion | 7.1 | 22.71 |
| HORVU1Hr1G057290.1 | Barley | cytosol | 1.05 | 14.73 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:12.3.3.8.2 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | UniProt:A0A287V7Q1 | InterPro:Amino_oxidase |
| ncoils:Coil | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:HORVU6Hr1G092910 | EnsemblPlants:HORVU6Hr1G092910.1 | InterPro:Homeobox-like_sf | InterPro:IPR007526 | InterPro:IPR035441 | InterPro:IPR036188 |
| InterPro:IPR036388 | PFAM:PF01593 | PFAM:PF04433 | PRINTS:PR00419 | PFscan:PS50934 | PANTHER:PTHR10742 |
| PANTHER:PTHR10742:SF354 | SUPFAM:SSF46689 | SUPFAM:SSF47676 | SUPFAM:SSF51905 | SUPFAM:SSF54373 | InterPro:SWIRM |
| InterPro:TFIIS/LEDGF_dom_sf | UniParc:UPI000B45F91F | InterPro:WH-like_DNA-bd_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr6H:+:578451278..578461593
Molecular Weight (calculated)
196293.0 Da
IEP (calculated)
6.024
GRAVY (calculated)
-0.460
Length
1818 amino acids
Sequence
(BLAST)
(BLAST)
0001: GEAVAVAAAA GTEDLQEGGD VEDMGEGVAD EGGDLEAPAN VVPGEDGVKV PGGDLGLGDS LSVLFRKPGR KPRQQASKNE EADGVEAADS QAEEALNGGS
0101: GGLGSDEAAK GTKKRRRRRT KAEMEEMRAA AAAAAENYAN AMAGDGSPRR SKAKPKAAYS DRCSRAAARR AVGELAGLPV GELAAPGPPP VSERNPNDKE
0201: EAADKEEAVD KEEAADDGLS LGETLLQDVE TSRIVEDGSR NSSDAASHCV KLPARADNCR GLNPCSGGEP AEKASHSAAN ASADGVSDAR TCSETLAEDA
0301: KADAVFSQDK PPAPTLKRKP GRKPKEAPKK PVRRKDLPKV SADDKPVEIA ESDASSKQRQ RKNKFLLARS TTVQSNSSLD NKAGSAGDIK YGNIKPNAAV
0401: PTEESLDQPA AYGVRESRAA KDSRASHNMA ASAKEINIID VAAPSNFEDM ENASKVKRLT RNSRKRKHGD MAYEGDVDWE TLMHEQGLFS NPAASFADQS
0501: VKPKDKIKAL EVLENGGVAA VSAGLMAEAV SPMEKLKFKD VLKRKGGLKD YLECRNMILS CWNKDVKHLL DLADCDLSNI PMEDDSPRQI LIRDVYRFLD
0601: QNGYINAGIA SAKVTKDHGT LCSEVVEAAK LNELPKMEPV RVEGDILAVS LQNKDHDQVA LGPLTEESKE NNVPDAHCDV QELIPHLQSK EQAFEEKNLD
0701: VSTEAGGALL PSINISSVGN TEGPSLDKPE AAVIEHPGNN CEVNHRVESG GHCKKIIIVG AGPAGLTAAR HLRRQGFAVT VLEARDRIGG RVYTDRTSLS
0801: VPVDLGASII TGVEADIATE RRADPSSLIC SQLGLELTVL KSACPLYDVV SGNKVPDDLD DELESEYNGL LDEMEQLFEQ NGESALGLSL EDGLEYTLRK
0901: KRAAHVVSSV GHDDQLISMS NRGGVDISKN ASTEKEIAHC GEDDKTDVLS PLERRVMNWH FAHLEYGCAA MLKSVSLPYW NQDDVYGGFG GPHCMIKGGY
1001: GAVLESLAEG LDVQLNHVVT EVMYRPDESD ASRISGKTVK VCTSNGAEFV GDAVLITVPL GCLKAHAIKF SPSLPDWKTS SIDRLGFGVL NKIVMEFPEV
1101: FWDENVDYFG ATAEQTDLRG QCFMFWNLKK TVGAPVIIAL LVGKAAIDGQ SISSDAHVSN AMVVLRKLFT DAAVRDPVAS VVTNWGLDPF SRGAYSYVAV
1201: GASGQDYDII GRPVANCLFF AGEATCKEHP DTVGGAILSG LREAVRIIDL VHSGKDYVAE VEALQTYQVQ SDSERNEVRD MSNRLEAREL STALCKNSSD
1301: ASYAVASKES VLQEMFFSAQ TTPGRLHLAK ELLKLPSDAL KSFAGSKEGL TKLNSWILDS LGKNATQLLR HCVRLLLLVS TDLVAVRLSG IGRTVKEKVC
1401: VHTSRDIRAI ARQLVSMWIE VFRKEKASNG ALKLLRRLPS VESSKTRSKD LHSGMRVPHV PNEAGAQRVR SAGSHSPHRT SKKPDKIVKL SSIMATKSDG
1501: SSLRSPKQHH DPEPKANQGM VMSEEEAAAF AAAEAARAAA IAAAQAYASA EAVISKPREL PKIPSFGDFA RRDHHLDESD TRKKMASDNH GRLECISEID
1601: SRNGKTKNSS AEHANCPDVD SSKMTVDNCT QRSYSNEKAC LINIRDNSAE SGAVDSRFTR AWVDIDAVSI DGVKHPLAIE RWQAQAMEAD KEFYSRIRIP
1701: LEEDSGSQKQ TCKSSASQVA ESKPASEGQS RGVEHIKQGL ISFISTLLMP LYKSKKIDRE AYKTMMRKAV TKIIDACTEG EKLMTANEFL DFRRKTKIQT
1801: FVDKLVERHW HLAPAPKS
0101: GGLGSDEAAK GTKKRRRRRT KAEMEEMRAA AAAAAENYAN AMAGDGSPRR SKAKPKAAYS DRCSRAAARR AVGELAGLPV GELAAPGPPP VSERNPNDKE
0201: EAADKEEAVD KEEAADDGLS LGETLLQDVE TSRIVEDGSR NSSDAASHCV KLPARADNCR GLNPCSGGEP AEKASHSAAN ASADGVSDAR TCSETLAEDA
0301: KADAVFSQDK PPAPTLKRKP GRKPKEAPKK PVRRKDLPKV SADDKPVEIA ESDASSKQRQ RKNKFLLARS TTVQSNSSLD NKAGSAGDIK YGNIKPNAAV
0401: PTEESLDQPA AYGVRESRAA KDSRASHNMA ASAKEINIID VAAPSNFEDM ENASKVKRLT RNSRKRKHGD MAYEGDVDWE TLMHEQGLFS NPAASFADQS
0501: VKPKDKIKAL EVLENGGVAA VSAGLMAEAV SPMEKLKFKD VLKRKGGLKD YLECRNMILS CWNKDVKHLL DLADCDLSNI PMEDDSPRQI LIRDVYRFLD
0601: QNGYINAGIA SAKVTKDHGT LCSEVVEAAK LNELPKMEPV RVEGDILAVS LQNKDHDQVA LGPLTEESKE NNVPDAHCDV QELIPHLQSK EQAFEEKNLD
0701: VSTEAGGALL PSINISSVGN TEGPSLDKPE AAVIEHPGNN CEVNHRVESG GHCKKIIIVG AGPAGLTAAR HLRRQGFAVT VLEARDRIGG RVYTDRTSLS
0801: VPVDLGASII TGVEADIATE RRADPSSLIC SQLGLELTVL KSACPLYDVV SGNKVPDDLD DELESEYNGL LDEMEQLFEQ NGESALGLSL EDGLEYTLRK
0901: KRAAHVVSSV GHDDQLISMS NRGGVDISKN ASTEKEIAHC GEDDKTDVLS PLERRVMNWH FAHLEYGCAA MLKSVSLPYW NQDDVYGGFG GPHCMIKGGY
1001: GAVLESLAEG LDVQLNHVVT EVMYRPDESD ASRISGKTVK VCTSNGAEFV GDAVLITVPL GCLKAHAIKF SPSLPDWKTS SIDRLGFGVL NKIVMEFPEV
1101: FWDENVDYFG ATAEQTDLRG QCFMFWNLKK TVGAPVIIAL LVGKAAIDGQ SISSDAHVSN AMVVLRKLFT DAAVRDPVAS VVTNWGLDPF SRGAYSYVAV
1201: GASGQDYDII GRPVANCLFF AGEATCKEHP DTVGGAILSG LREAVRIIDL VHSGKDYVAE VEALQTYQVQ SDSERNEVRD MSNRLEAREL STALCKNSSD
1301: ASYAVASKES VLQEMFFSAQ TTPGRLHLAK ELLKLPSDAL KSFAGSKEGL TKLNSWILDS LGKNATQLLR HCVRLLLLVS TDLVAVRLSG IGRTVKEKVC
1401: VHTSRDIRAI ARQLVSMWIE VFRKEKASNG ALKLLRRLPS VESSKTRSKD LHSGMRVPHV PNEAGAQRVR SAGSHSPHRT SKKPDKIVKL SSIMATKSDG
1501: SSLRSPKQHH DPEPKANQGM VMSEEEAAAF AAAEAARAAA IAAAQAYASA EAVISKPREL PKIPSFGDFA RRDHHLDESD TRKKMASDNH GRLECISEID
1601: SRNGKTKNSS AEHANCPDVD SSKMTVDNCT QRSYSNEKAC LINIRDNSAE SGAVDSRFTR AWVDIDAVSI DGVKHPLAIE RWQAQAMEAD KEFYSRIRIP
1701: LEEDSGSQKQ TCKSSASQVA ESKPASEGQS RGVEHIKQGL ISFISTLLMP LYKSKKIDRE AYKTMMRKAV TKIIDACTEG EKLMTANEFL DFRRKTKIQT
1801: FVDKLVERHW HLAPAPKS
0001: MDGKEKKSGS KRGSKVFQFD DDADDDEPIG SLLEIMKHKS SKKDKVETES TGKQRQKQVV EKKLSALGKD SEDMDDTLAS FRKRLKGNKK GVESGTSRVR
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
Arabidopsis Description
LDL3Lysine-specific histone demethylase 1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JLS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.