Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029714_P001 | Maize | extracellular | 90.83 | 90.08 |
| Os10t0532100-01 | Rice | nucleus | 46.36 | 69.04 |
| Os10t0532150-00 | Rice | cytosol, nucleus, plastid | 9.51 | 68.95 |
| TraesCS6A01G405500.2 | Wheat | nucleus | 65.54 | 63.66 |
| TraesCS6D01G389200.1 | Wheat | nucleus | 65.15 | 63.28 |
| HORVU6Hr1G092910.1 | Barley | nucleus | 63.81 | 63.15 |
| TraesCS6B01G449900.1 | Wheat | nucleus | 64.7 | 63.06 |
| GSMUA_Achr2P09900_001 | Banana | cytosol | 42.52 | 54.06 |
| PGSC0003DMT400009649 | Potato | cytosol | 37.19 | 51.62 |
| CDY22771 | Canola | nucleus | 38.63 | 44.07 |
| CDY42542 | Canola | nucleus | 38.63 | 43.63 |
| Bra040571.1-P | Field mustard | nucleus | 38.13 | 43.45 |
| AT4G16310.4 | Thale cress | nucleus | 39.24 | 43.37 |
| KRH17390 | Soybean | nucleus | 43.91 | 41.71 |
| KRH05909 | Soybean | nucleus | 43.86 | 41.37 |
| Solyc04g081100.2.1 | Tomato | nucleus | 43.19 | 37.39 |
| EES12883 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 9.28 | 34.58 |
| EES13072 | Sorghum | plastid | 9.34 | 34.22 |
| EES13070 | Sorghum | cytosol, peroxisome, plastid | 9.06 | 33.47 |
| EES12649 | Sorghum | plastid | 13.62 | 30.32 |
| EES14528 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 12.67 | 29.96 |
| OQU85392 | Sorghum | nucleus | 13.9 | 29.41 |
| EES03507 | Sorghum | mitochondrion | 7.67 | 26.8 |
| KXG39969 | Sorghum | vacuole | 7.23 | 25.49 |
| OQU80059 | Sorghum | peroxisome | 7.45 | 23.93 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:12.3.3.8.2 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | EntrezGene:8062879 | InterPro:Amino_oxidase |
| UniProt:C5WUG8 | ncoils:Coil | EnsemblPlants:EER94594 | ProteinID:EER94594 | ProteinID:EER94594.1 | InterPro:FAD/NAD-bd_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:Homeobox-like_sf | InterPro:IPR007526 | InterPro:IPR035441 | InterPro:IPR036188 |
| InterPro:IPR036388 | PFAM:PF01593 | PFAM:PF04433 | PRINTS:PR00419 | PFscan:PS50934 | PANTHER:PTHR10742 |
| PANTHER:PTHR10742:SF354 | EnsemblPlantsGene:SORBI_3001G316700 | SUPFAM:SSF46689 | SUPFAM:SSF47676 | SUPFAM:SSF51905 | SUPFAM:SSF54373 |
| InterPro:SWIRM | InterPro:TFIIS/LEDGF_dom_sf | UniParc:UPI0001A830A0 | InterPro:WH-like_DNA-bd_sf | RefSeq:XP_002467596.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:60487674..60499952
Molecular Weight (calculated)
196786.0 Da
IEP (calculated)
5.973
GRAVY (calculated)
-0.422
Length
1799 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDTLASIRK KLKKRKKGKE SNDFGAVAEC GPEVPTLVQQ EDVQGVVDIG DADADEKSNL DVVKLEGRDV SGNCAQGLDN LGLKDSLSVL FARSGRKSRQ
0101: VSEEAEGMEV SCLHDGDGLN KGSGLAPDTA SKGTKRRRRR TKEEMKNACV QDRKASLPRK AKAKANGSES TRHYKVGACP GQALGGLSSV FNELEENAAD
0201: DGLFHRSSAE ELLRDVEATK VLNDGSINSF NGVTDHFEIS AWASNHPGLE SYSGNLDEKT SCTAANATNV GVSDAHTCSQ TLGKESSDDV DCSQGKSPTS
0301: TIKRKTALKP KQVPGKSVRR KEAVLSVDAD NKPTETTEII EANTTMVIEE NLDQLPVMGP KDSCSSHDIV GNNPVCLGAD MAAPVKDVDI VDVAAPLDYE
0401: DKENACASKV KLKRVTRGSK KRKHGDMAYE GDVDWETLMQ EQGLFSNPSA GFPDQSIKTK DQIKTSEVYE GGGDTGVAAV RAGLKAKTIT PIEKIKFKEV
0501: LKRKGGLQEY LECRNMILSR WSKDVKHLLD LADCGVSDVP LKDELPHQAL TRDVFLFLDQ YGYINAGIAS DKVAKGHDDT LYEVVEVPKL NESHQMESVS
0601: IQNSIVSVSQ KNEDFECGTS IECCRTVSVK NTECALVEAS NEKNCPTVHC GALKLLPHLK SDEHLTEKNN LDMSTEVRNA SLPSSNLDIQ RTLYLDSSVG
0701: KVEVPHQQEA REIENSGNNC QSDRVEFAVR GKRIIIVGAG PAGLTAARHL QRQGFSVTVL EARERIGGRV YTDRTSLSVP VDLGASIITG VEADIATERR
0801: ADPSSLICSQ LGLELTTLNS ACPLYDVVTG DKVPDSVDED LEAEYNGLLE ELALLFAQNG DSAIGLSLED GLEYALRKHR ATQPMDSVEQ DGHLRFMTNS
0901: GAVDISVSAS TGKDIDHCGK NDKIDVLSPI ERRLMNWHFA HLEYGCAATL KSLSLPYWNQ DDVYGGFGGA HCMIKGGYDT VLRNLAKGLD IRLNHVVTEV
1001: LYGPEELGAS CKDGRYVKVS TSTGSEFTGD AVLITVPLGC LKAETIKFSP SLPDWKVSSI NRLGFGLLNK IVLEFPEVFW DDNVDYFGAT AEETDLRGQC
1101: FMFWNLRKTV GAPVLIALLV GKAAIDGQSI SSGDHVNNAM VVLRKLFRNA SVPDPVASVV TNWGLDPFSR GAYSYVAVGA SGRDYDILGR PVENCLFFAG
1201: EATCKEHPDT VGGAILSGLR EAVRIIDLLN TGNDYIAEVE ALQTYQMQSD SERNEVRDMS NRLEACELST ALSKNSSDAM YPIVSKESLL QEMFFSAKTT
1301: SGRLHLAKEL LKLPTDVLKS FAGSKEGLHT LNSWILDSLG KNATQLLRHC VRLLVLVSTD LVAVRLSGIG KTVKEKVCVH TSRDIRAIAR QLVSVWIEVF
1401: RREKDRNGGL KLLRRIPSIE LSKTKSKDLQ SVKPALRVPN ETLDNNKVVS QRQRTRFASS QSPPKTNKKY ENKEMKLETV TAALSDGKLL SQKQQHGIES
1501: KVECGIPMSE EEAAAFAAAE AARVAAIAAA QAYASVEAEI SVPRELPEIP SFESFVIRDH HLDEPNTRKR ALKDNFGRLE CISENDSKNV KTKDLPDNTN
1601: CADADSLKIS HDNCTQQNHS NETACLANTD TGVVYGRFTR AWVDTDTICI DGVKDPLAIE RWQAQAMEAD KEFYSRIRIP DEDDSCSQKQ TCRSSASQGA
1701: DSKPASERQS RGVEHIKQGL VNFIASLLMP LYRGKKIDRE GYKSIMRKSV NKIIDTCSEG EKSMTTLEFL DAKRKIKIES FVNKMVDKHL HVVSKSAKP
0101: VSEEAEGMEV SCLHDGDGLN KGSGLAPDTA SKGTKRRRRR TKEEMKNACV QDRKASLPRK AKAKANGSES TRHYKVGACP GQALGGLSSV FNELEENAAD
0201: DGLFHRSSAE ELLRDVEATK VLNDGSINSF NGVTDHFEIS AWASNHPGLE SYSGNLDEKT SCTAANATNV GVSDAHTCSQ TLGKESSDDV DCSQGKSPTS
0301: TIKRKTALKP KQVPGKSVRR KEAVLSVDAD NKPTETTEII EANTTMVIEE NLDQLPVMGP KDSCSSHDIV GNNPVCLGAD MAAPVKDVDI VDVAAPLDYE
0401: DKENACASKV KLKRVTRGSK KRKHGDMAYE GDVDWETLMQ EQGLFSNPSA GFPDQSIKTK DQIKTSEVYE GGGDTGVAAV RAGLKAKTIT PIEKIKFKEV
0501: LKRKGGLQEY LECRNMILSR WSKDVKHLLD LADCGVSDVP LKDELPHQAL TRDVFLFLDQ YGYINAGIAS DKVAKGHDDT LYEVVEVPKL NESHQMESVS
0601: IQNSIVSVSQ KNEDFECGTS IECCRTVSVK NTECALVEAS NEKNCPTVHC GALKLLPHLK SDEHLTEKNN LDMSTEVRNA SLPSSNLDIQ RTLYLDSSVG
0701: KVEVPHQQEA REIENSGNNC QSDRVEFAVR GKRIIIVGAG PAGLTAARHL QRQGFSVTVL EARERIGGRV YTDRTSLSVP VDLGASIITG VEADIATERR
0801: ADPSSLICSQ LGLELTTLNS ACPLYDVVTG DKVPDSVDED LEAEYNGLLE ELALLFAQNG DSAIGLSLED GLEYALRKHR ATQPMDSVEQ DGHLRFMTNS
0901: GAVDISVSAS TGKDIDHCGK NDKIDVLSPI ERRLMNWHFA HLEYGCAATL KSLSLPYWNQ DDVYGGFGGA HCMIKGGYDT VLRNLAKGLD IRLNHVVTEV
1001: LYGPEELGAS CKDGRYVKVS TSTGSEFTGD AVLITVPLGC LKAETIKFSP SLPDWKVSSI NRLGFGLLNK IVLEFPEVFW DDNVDYFGAT AEETDLRGQC
1101: FMFWNLRKTV GAPVLIALLV GKAAIDGQSI SSGDHVNNAM VVLRKLFRNA SVPDPVASVV TNWGLDPFSR GAYSYVAVGA SGRDYDILGR PVENCLFFAG
1201: EATCKEHPDT VGGAILSGLR EAVRIIDLLN TGNDYIAEVE ALQTYQMQSD SERNEVRDMS NRLEACELST ALSKNSSDAM YPIVSKESLL QEMFFSAKTT
1301: SGRLHLAKEL LKLPTDVLKS FAGSKEGLHT LNSWILDSLG KNATQLLRHC VRLLVLVSTD LVAVRLSGIG KTVKEKVCVH TSRDIRAIAR QLVSVWIEVF
1401: RREKDRNGGL KLLRRIPSIE LSKTKSKDLQ SVKPALRVPN ETLDNNKVVS QRQRTRFASS QSPPKTNKKY ENKEMKLETV TAALSDGKLL SQKQQHGIES
1501: KVECGIPMSE EEAAAFAAAE AARVAAIAAA QAYASVEAEI SVPRELPEIP SFESFVIRDH HLDEPNTRKR ALKDNFGRLE CISENDSKNV KTKDLPDNTN
1601: CADADSLKIS HDNCTQQNHS NETACLANTD TGVVYGRFTR AWVDTDTICI DGVKDPLAIE RWQAQAMEAD KEFYSRIRIP DEDDSCSQKQ TCRSSASQGA
1701: DSKPASERQS RGVEHIKQGL VNFIASLLMP LYRGKKIDRE GYKSIMRKSV NKIIDTCSEG EKSMTTLEFL DAKRKIKIES FVNKMVDKHL HVVSKSAKP
0001: MDGKEKKSGS KRGSKVFQFD DDADDDEPIG SLLEIMKHKS SKKDKVETES TGKQRQKQVV EKKLSALGKD SEDMDDTLAS FRKRLKGNKK GVESGTSRVR
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
Arabidopsis Description
LDL3Lysine-specific histone demethylase 1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JLS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.