CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002266_P003	Maize	peroxisome	96.48	96.48
Zm00001d026334_P001	Maize	peroxisome	96.07	96.27
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	90.68	92.8
Os04t0623300-01	Rice	peroxisome	91.3	91.12
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	89.44	89.26
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	89.23	89.05
TraesCS2A01G467300.1	Wheat	peroxisome	89.23	89.05
GSMUA_Achr5P00660_001	Banana	peroxisome	74.33	74.02
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	73.29	72.24
KRH73583	Soybean	cytosol, peroxisome, plastid	72.46	71.87
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	72.88	71.84
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	72.46	71.57
VIT_12s0028g01120.t01	Wine grape	cytosol	72.46	71.43
GSMUA_Achr11P...	Banana	mitochondrion	75.98	70.99
CDX67773	Canola	peroxisome	71.84	70.96
Bra003362.1-P	Field mustard	cytosol	71.84	70.96
Solyc12g006370.1.1	Tomato	plastid	71.64	70.9
Bra037741.1-P	Field mustard	peroxisome	71.01	70.72
PGSC0003DMT400074125	Potato	plastid	71.43	70.7
CDY14867	Canola	peroxisome	71.01	70.0
CDY30376	Canola	peroxisome	71.01	70.0
CDY55500	Canola	peroxisome	71.01	70.0
Bra004737.1-P	Field mustard	peroxisome	71.01	70.0
AT3G59050.1	Thale cress	cytosol, nucleus, peroxisome	70.6	69.88
AT2G43020.1	Thale cress	peroxisome	70.81	69.8
CDY53655	Canola	peroxisome	70.6	69.59
CDY42808	Canola	peroxisome	68.94	69.38
CDX83508	Canola	peroxisome	68.74	69.17
Bra000284.1-P	Field mustard	cytosol	68.53	68.96
KRG99036	Soybean	plasma membrane, vacuole	70.6	68.47
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	68.12	67.14
CDX98346	Canola	cytosol	71.43	62.84
EES13072	Sorghum	plastid	59.63	58.66
EES13070	Sorghum	cytosol, peroxisome, plastid	58.39	57.91
KXG39969	Sorghum	vacuole	23.4	22.16
OQU80059	Sorghum	peroxisome	25.05	21.61
EES14528	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	31.26	19.84
EES03507	Sorghum	mitochondrion	20.91	19.61
EES12649	Sorghum	plastid	30.02	17.95
OQU85392	Sorghum	nucleus	28.99	16.47
EER94594	Sorghum	nucleus	34.58	9.28

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	EntrezGene:8074727	InterPro:Amino_oxidase	UniProt:C5YG61
EnsemblPlants:EES12883	ProteinID:EES12883	ProteinID:EES12883.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188
PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	EnsemblPlantsGene:SORBI_3006G220200	SUPFAM:SSF51905
SUPFAM:SSF54373	unigene:Sbi.3786	UniParc:UPI0001A876A8	RefSeq:XP_002448555.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:56721549..56726911

Molecular Weight (calculated)

53529.2 Da

IEP (calculated)

6.003

GRAVY (calculated)

-0.102

Length

483 amino acids

Sequence
(BLAST)

001: MANNSSFGEN ARRKPHTPTA IVIGGGFAGL AAADALRNAS FQVILLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCEEN PLAPIIGRLG LPLYRTSGDD
101: SVLFDHDLES YALYDTNGRQ VPQELVEKIG KVFETILEET GKLREGTNED MSIAKAIAIV MDRNPHFRQE GIAHEVLQWY LCRMEGWFAT DADSISLQGW
201: DQEVLLPGGH GLMVRGYRPV INTLAKGLDI RLNHKVVEIV RHRNRVEVTV SSGKTFVADA AVVAVPLGVL KAQTIKFEPR LPDWKEEAIR ELTVGIENKI
301: VLHFGQVFWP NVEFLGVVSS STYGCSYFLN LHKATGHPVL VYMPAGRLAR DIEKMSDEAA AQFAFSQLKK ILPNAAEPIN YLVSHWGSDE NSLGSYTFDG
401: VNKPRDLYEK LRIPVDNLFF AGEATSLKYT GTVHGAFSTG VMAAEECKMR VLERFRELDM LEMCHPAMGE DSPVSVPLLI SRL

Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)

001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Arabidopsis Description

PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.