Factsheet for TraesCS3B01G280200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G251100.1	Wheat	golgi	87.77	90.63
TraesCS3A01G250700.1	Wheat	mitochondrion	90.53	90.0
HORVU3Hr1G066920.4	Barley	extracellular	90.93	89.34
Os01t0710200-01	Rice	mitochondrion	79.09	78.32
Zm00001d043681_P001	Maize	mitochondrion	76.53	76.98
EES03507	Sorghum	mitochondrion	77.71	76.5
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.35	57.04
GSMUA_Achr3P32350_001	Banana	mitochondrion	55.42	55.53
VIT_11s0016g02180.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	48.52	47.4
CDY54281	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	45.56	47.14
Solyc05g018880.1.1	Tomato	endoplasmic reticulum	47.53	47.07
KRH02713	Soybean	golgi	48.72	46.6
CDY43522	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	45.36	46.37
PGSC0003DMT400045965	Potato	endoplasmic reticulum	47.53	46.35
PGSC0003DMT400055123	Potato	cytosol	47.34	46.15
Solyc07g039310.1.1	Tomato	golgi	46.55	46.0
CDY30206	Canola	mitochondrion	45.56	45.92
KRH19156	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.52	45.72
Bra024137.1-P	Field mustard	mitochondrion	46.35	45.63
Bra011132.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	46.35	43.44
KRH12386	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	49.7	43.37
CDY06780	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	45.96	43.15
AT4G29720.1	Thale cress	mitochondrion	45.17	42.96
KRH37387	Soybean	golgi	49.7	42.0
Solyc03g007160.1.1	Tomato	plasma membrane, vacuole	14.79	40.54
PGSC0003DMT400094539	Potato	golgi	41.22	38.7
Solyc12g008850.1.1	Tomato	cytosol	43.59	32.89
PGSC0003DMT400000891	Potato	endoplasmic reticulum	43.0	27.22
TraesCS2B01G579100.1	Wheat	plastid	22.68	23.47
TraesCS7B01G461800.1	Wheat	plasma membrane, vacuole	22.68	23.23
TraesCS7B01G280700.1	Wheat	cytosol	21.5	22.85
TraesCS4B01G265900.1	Wheat	vacuole	21.3	21.91
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	20.91	21.9
TraesCS2B01G579000.1	Wheat	peroxisome	22.29	21.48
TraesCS4B01G385300.1	Wheat	endoplasmic reticulum	19.92	21.0
TraesCS7B01G206700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	27.02	18.03
TraesCS6B01G348300.1	Wheat	nucleus	28.01	17.21
TraesCS2B01G425100.1	Wheat	plastid	26.04	16.36
TraesCS6B01G449900.1	Wheat	nucleus	25.44	6.99

Protein Annotations

EnsemblPlants:TraesCS3B01G280200.1	EnsemblPlantsGene:TraesCS3B01G280200	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR10742	PANTHER:PTHR10742:SF320	PFAM:PF01593	SEG:seg	SUPFAM:SSF51905
SUPFAM:SSF54373	MapMan:8.5.2.3	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:450224214..450225737

Molecular Weight (calculated)

54521.7 Da

IEP (calculated)

5.039

GRAVY (calculated)

-0.166

Length

507 amino acids

Sequence
(BLAST)

001: MVEKKPRVVI VGAGIAGLSA AQQLCGAGRD KLEVVVVEAG CRAGGRVYTS EFAGHRLEMG ATWVQGIVGS PVYALAREAG ALRQEAADLP YERMDGFPDS
101: VLTVAEGGDV VDAVTVAKPI EELYRDMMEA ARAGEAVGGG GVEDYLRRGL RAYQAARPGG SKELEEVEQA LLVMHINRER TDTSADDLGD LDLAAEGEYR
201: DFPGDHVTIP GGYTRVVEHL AAALPPGTVR LGLRLRRLDW GETPVRLHFA DEATTTLTAD HVILTVSLGV LKASIGEDVS AAGAIAFDPP LPQFKREAVA
301: RLGFGVVDKL FIELEDVEMP EPDGDDEQQA RTAPPTFPFL HMAFVGDVAK IPWWMRGTES VCPVHAGSTV ALAWFAGREA AHLESLPDDE VIRAVHSTLE
401: SFLPGPPRRC SGAGAGATPR RRVRRIKRSG WATDPLFLGS YSYVAVGSSG EDLDRMAEPL PRGPEAGRTP LSVLFAGEAT QRTHYSTTHA AYLSGVREAD
501: RLLQHYR

Best Arabidopsis Sequence Match ( AT4G29720.1 )
(BLAST)

001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF

Arabidopsis Description

PAO5Probable polyamine oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU79]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.