Factsheet for TraesCS4B01G385300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G549600.1	Wheat	plastid	89.19	86.67
TraesCS4B01G265900.1	Wheat	vacuole	84.41	82.35
Zm00001d024281_P001	Maize	extracellular	81.91	78.8
Os09t0368500-01	Rice	golgi	72.97	74.05
Os09t0368200-00	Rice	golgi, vacuole	75.47	73.19
Os03t0193400-00	Rice	nucleus, peroxisome	29.94	71.29
TraesCS7B01G461800.1	Wheat	plasma membrane, vacuole	72.35	70.3
OQU80059	Sorghum	peroxisome	80.67	69.29
TraesCS7B01G280700.1	Wheat	cytosol	65.28	65.83
VIT_01s0127g00770.t01	Wine grape	cytosol	12.27	64.84
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	33.68	59.56
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	59.04	57.37
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	55.93	53.27
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	52.6	51.74
KRH39911	Soybean	plasma membrane	39.29	40.65
AT5G13700.1	Thale cress	extracellular	38.67	39.41
CDX70516	Canola	extracellular	38.46	39.28
KRH13982	Soybean	plasma membrane	40.75	39.12
Bra006210.1-P	Field mustard	extracellular	38.25	39.07
KRH32977	Soybean	plasma membrane	40.54	39.0
CDX78534	Canola	extracellular	38.46	38.54
Solyc01g087590.2.1	Tomato	vacuole	39.09	37.83
PGSC0003DMT400017667	Potato	vacuole	38.67	37.58
KRH69303	Soybean	vacuole	25.36	31.69
TraesCS2B01G579100.1	Wheat	plastid	22.66	22.24
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	21.62	21.49
TraesCS3B01G280200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	21.0	19.92
TraesCS2B01G579000.1	Wheat	peroxisome	21.21	19.39
TraesCS7B01G206700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	23.49	14.87
TraesCS6B01G348300.1	Wheat	nucleus	24.95	14.55
TraesCS2B01G425100.1	Wheat	plastid	23.91	14.25
TraesCS6B01G449900.1	Wheat	nucleus	25.99	6.77

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.1	InterPro:Amino_oxidase	ncoils:Coil	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR036188	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF313
SUPFAM:SSF51905	SUPFAM:SSF54373	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4B01G385300	EnsemblPlants:TraesCS4B01G385300.1	SEG:seg

Description

No Description!

Coordinates

chr4B:-:664194024..664200372

Molecular Weight (calculated)

53679.7 Da

IEP (calculated)

6.030

GRAVY (calculated)

-0.335

Length

481 amino acids

Sequence
(BLAST)

001: MTPTGATAAL VLAVLTLAHH GSLAAAAGGG PRVIIVGAGM SGISAGKRLS EAGITDLVIL EATDHVGGRM HKRDLSGIKV EMGVNGGKMN PIWPIVNSTL
101: KLTNFRSDFD DLASNVYKEK GGVYKKAYVQ KRIDRSDEVE EDGDKLSAKL HPSGQDDMSI LAMQRLNDHL PNGPSSPVDM ILDYFKYDYE FAEPPRVTSL
201: QNTVPLATFS DFGDDVYFVA DQRGYEAVVY YLAGQYLKAD KAGNIVDPRL QLNKVVREIS YSTRGVEVKT EDNKVYKADY VMVSTSLGVL QSDLIQFKPQ
301: LPTWKVLSIY QFDMAVYTKI LSSSPRSSGR KVKSQWNCYV IQEFEAQYPD ANVLLVTVTD EESRRIEQQS DNQTKVEIME VLRSMFPGED VPDATDILVP
401: RWWSNRFYKG TFSNWPIGVN RYEYDQLRAP VGRVYFTGEH TSEHYNGYVH GAYLSGIDSA DILINCAQKS MCKYHVQGKY D

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.