Factsheet for HORVU1Hr1G077680.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G328800.1	Wheat	plastid	74.44	80.82
TraesCS1B01G342500.1	Wheat	plastid	81.58	80.67
TraesCS1D01G331200.1	Wheat	nucleus	71.43	80.51
TraesCS1D01G331100.1	Wheat	plastid	83.83	79.93
HORVU2Hr1G093660.1	Barley	nucleus	73.31	67.01
GSMUA_Achr4P05520_001	Banana	nucleus, plastid	32.71	54.04
GSMUA_Achr4P12060_001	Banana	nucleus	37.59	48.54
Os03t0860100-01	Rice	nucleus	40.6	48.0
GSMUA_AchrUn_...	Banana	nucleus	28.95	47.83
Zm00001d034920_P001	Maize	plastid	50.38	47.02
EER90462	Sorghum	plastid	50.75	45.92
VIT_07s0005g03230.t01	Wine grape	nucleus	37.97	45.29
VIT_07s0005g03260.t01	Wine grape	nucleus	37.97	44.69
HORVU2Hr1G006370.1	Barley	nucleus	26.32	42.68
Bra032433.1-P	Field mustard	nucleus	35.34	41.23
CDY09984	Canola	nucleus	35.34	41.23
CDY06202	Canola	nucleus	35.34	41.05
CDY10178	Canola	nucleus	34.21	40.81
VIT_07s0005g03270.t01	Wine grape	nucleus	33.83	40.54
CDY10783	Canola	nucleus	33.46	40.09
CDY47720	Canola	nucleus	29.32	39.59
AT1G06160.1	Thale cress	nucleus	35.34	38.52
Bra015478.1-P	Field mustard	nucleus	33.83	38.14
HORVU0Hr1G013490.1	Barley	nucleus	35.71	38.0
HORVU5Hr1G079980.1	Barley	nucleus	35.71	38.0
CDY72380	Canola	nucleus	33.08	37.77
Bra022832.1-P	Field mustard	nucleus	33.08	37.77
VIT_07s0005g03280.t01	Wine grape	nucleus	30.83	37.61
CDY24746	Canola	nucleus	33.83	37.5
Bra018271.1-P	Field mustard	nucleus	33.83	37.5
CDY23951	Canola	nucleus	32.71	37.34
AT2G31230.1	Thale cress	nucleus	33.83	37.04
Bra021712.1-P	Field mustard	nucleus	33.83	33.96
CDY15417	Canola	nucleus	33.83	33.71
HORVU4Hr1G079630.1	Barley	nucleus	29.7	33.62
HORVU2Hr1G103660.2	Barley	nucleus, plastid	26.69	32.57
HORVU4Hr1G000700.1	Barley	nucleus	34.59	26.44

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A287GC76	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G077680	EnsemblPlants:HORVU1Hr1G077680.2
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF67	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B466C0E	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:-:518159565..518160365

Molecular Weight (calculated)

27977.7 Da

IEP (calculated)

9.055

GRAVY (calculated)

-0.404

Length

266 amino acids

Sequence
(BLAST)

001: PSSTCTASSS PSTSPRLTAG VVNFLARRAM TTHHRPAAAA PFPLHSPGSS TGSADSAPWT SCCHHRHAPA TPPPLPSDTS GADEKLLLNV LSRHQGASAH
101: EAAAAALPLK QGAADAERAF RGVRKRPWGK YAAEIRDSTR NGVRVWLGTF ESPEAAALAY DQAAFALRGG AAVLNFPADQ VRRSLEGAEE DTRGVSPVLA
201: LKRRHSMRSR KAAPSSAACR KARGRPEGVV MELEDLGAEY LEELLGASDG MATSASDSWC SSHHSI

Best Arabidopsis Sequence Match ( AT3G23240.1 )
(BLAST)

001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW

Arabidopsis Description

ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.