Factsheet for HORVU4Hr1G000700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G001300.1	Wheat	nucleus	74.43	76.18
TraesCS4B01G002000.1	Wheat	nucleus	70.69	74.55
Os09t0572000-01	Rice	nucleus	39.66	57.98
Zm00001d019734_P001	Maize	nucleus	38.22	51.75
KXG35152	Sorghum	nucleus	39.66	51.3
GSMUA_Achr4P05520_001	Banana	nucleus, plastid	23.56	50.93
GSMUA_AchrUn_...	Banana	nucleus	23.28	50.31
GSMUA_Achr4P12060_001	Banana	nucleus	29.02	49.03
HORVU2Hr1G006370.1	Barley	nucleus	22.13	46.95
VIT_07s0005g03230.t01	Wine grape	nucleus	28.45	44.39
VIT_07s0005g03260.t01	Wine grape	nucleus	28.45	43.81
VIT_07s0005g03270.t01	Wine grape	nucleus	27.01	42.34
HORVU5Hr1G079980.1	Barley	nucleus	29.89	41.6
HORVU0Hr1G013490.1	Barley	nucleus	29.89	41.6
HORVU2Hr1G103660.2	Barley	nucleus, plastid	25.29	40.37
VIT_07s0005g03280.t01	Wine grape	nucleus	25.0	39.91
HORVU4Hr1G079630.1	Barley	nucleus	25.29	37.45
CDY10178	Canola	nucleus	23.85	37.22
CDY10783	Canola	nucleus	23.56	36.94
AT1G06160.1	Thale cress	nucleus	25.29	36.07
CDY47720	Canola	nucleus	20.4	36.04
CDY09984	Canola	nucleus	23.56	35.96
Bra032433.1-P	Field mustard	nucleus	23.28	35.53
CDY06202	Canola	nucleus	23.28	35.37
Bra022832.1-P	Field mustard	nucleus	23.28	34.76
CDY23951	Canola	nucleus	23.28	34.76
CDY72380	Canola	nucleus	23.28	34.76
Bra015478.1-P	Field mustard	nucleus	23.56	34.75
HORVU1Hr1G077680.2	Barley	plastid	26.44	34.59
AT2G31230.1	Thale cress	nucleus	24.14	34.57
CDY24746	Canola	nucleus	23.56	34.17
Bra018271.1-P	Field mustard	nucleus	23.56	34.17
HORVU2Hr1G093660.1	Barley	nucleus	27.59	32.99
CDY15417	Canola	nucleus	24.71	32.21
Bra021712.1-P	Field mustard	nucleus	24.43	32.08

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	UniProt:A0A287MW63	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G000700	EnsemblPlants:HORVU4Hr1G000700.1
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF34	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B4708D7	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:+:1206549..1208197

Molecular Weight (calculated)

37871.1 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.510

Length

348 amino acids

Sequence
(BLAST)

001: TVLRSFFFLF FQTNRGRASP PSMEQHFIHF GATTSYSTPT PPPEAQASPT FASSTPDYHS SPSAFDMGDT DDMHLLNTLL LQMDASHMPN AHYSFDMDMD
101: MDMEPSSSST SSSSSSYSYS YSSSDQQQGM PTTTEQSPSK RRASSTQPHP AATKGLIGVR KRPWGKFAAE IRDSTRKGAR VWLGTFNTPE AAAMAYDQAA
201: FSVRGAAAIL NYPVDRVQES LRTLALRPDT AGGSPVLALK RRHSIRKRSP NKAKKTTAGA TILAPTNTKM ITTNDVDQAA AASTAGSGVV ELEDLGADYL
301: EELLRVSDEP SASSTMVMTG YDHQHHHHVY VDDQSALTNM APMLFPHC

Best Arabidopsis Sequence Match ( AT2G31230.1 )
(BLAST)

001: MEYSQSSMYS SPSSWSSSQE SLLWNESCFL DQSSEPQAFF CPNYDYSDDF FSFESPEMMI KEEIQNGDVS NSEEEEKVGI DEERSYRGVR KRPWGKFAAE
101: IRDSTRNGIR VWLGTFDKAE EAALAYDQAA FATKGSLATL NFPVEVVRES LKKMENVNLH DGGSPVMALK RKHSLRNRPR GKKRSSSSSS SSSNSSSCSS
201: SSSTSSTSRS SSKQSVVKQE SGTLVVFEDL GAEYLEQLLM SSC

Arabidopsis Description

ERF15Ethylene-responsive transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYM0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.