Factsheet for HORVU2Hr1G093660.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G393500.1	Wheat	plastid	86.94	90.36
TraesCS2B01G411500.1	Wheat	plastid	86.25	89.96
TraesCS2D01G391400.1	Wheat	plastid	85.91	89.61
HORVU1Hr1G077680.2	Barley	plastid	67.01	73.31
GSMUA_Achr4P05520_001	Banana	nucleus, plastid	32.99	59.63
GSMUA_AchrUn_...	Banana	nucleus	29.55	53.42
GSMUA_Achr4P12060_001	Banana	nucleus	37.46	52.91
VIT_07s0005g03230.t01	Wine grape	nucleus	39.18	51.12
VIT_07s0005g03260.t01	Wine grape	nucleus	39.18	50.44
Os03t0860100-01	Rice	nucleus	38.83	50.22
Zm00001d034920_P001	Maize	plastid	47.08	48.07
EER90462	Sorghum	plastid	47.77	47.28
VIT_07s0005g03270.t01	Wine grape	nucleus	34.36	45.05
CDY10783	Canola	nucleus	32.3	42.34
HORVU2Hr1G006370.1	Barley	nucleus	23.71	42.07
CDY10178	Canola	nucleus	31.62	41.26
VIT_07s0005g03280.t01	Wine grape	nucleus	30.58	40.83
Bra032433.1-P	Field mustard	nucleus	31.96	40.79
CDY09984	Canola	nucleus	31.96	40.79
CDY06202	Canola	nucleus	31.96	40.61
CDY47720	Canola	nucleus	27.49	40.61
Bra022832.1-P	Field mustard	nucleus	31.96	39.91
CDY72380	Canola	nucleus	31.96	39.91
CDY24746	Canola	nucleus	32.65	39.58
Bra018271.1-P	Field mustard	nucleus	32.65	39.58
CDY23951	Canola	nucleus	31.62	39.48
AT2G31230.1	Thale cress	nucleus	32.65	39.09
Bra015478.1-P	Field mustard	nucleus	31.27	38.56
AT1G06160.1	Thale cress	nucleus	32.3	38.52
HORVU5Hr1G079980.1	Barley	nucleus	32.3	37.6
HORVU0Hr1G013490.1	Barley	nucleus	32.3	37.6
Bra021712.1-P	Field mustard	nucleus	32.65	35.85
CDY15417	Canola	nucleus	32.65	35.58
HORVU4Hr1G079630.1	Barley	nucleus	27.15	33.62
HORVU2Hr1G103660.2	Barley	nucleus, plastid	25.09	33.49
HORVU4Hr1G000700.1	Barley	nucleus	32.99	27.59

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A287IZE9	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G093660	EnsemblPlants:HORVU2Hr1G093660.1
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF67	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B4700E9	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:+:659081830..659083161

Molecular Weight (calculated)

31359.6 Da

IEP (calculated)

6.682

GRAVY (calculated)

-0.504

Length

291 amino acids

Sequence
(BLAST)

001: MESHFQNFQL DNMSGPSSTA SSSSTSPRLT AGVVSFLARR AMTTQNHQRA AAFLHSPGSS TGSADTAPWH HRAPATPPPL LPFDANDADE MLLLDMLSQH
101: QQEDMHTATA PVPATTAATA VKREAREEEE EAKVAVGGSG RAFRGVRKRP WGKFAAEIRD STRNGVRVWL GTFDSPEAAA LAYDQAAFAM RGGAAVLNFP
201: ADQVRRSLEG AEDDVCGRAD GLSPVLALKR RHSMHRRAAT KRKAMPARPG RPEGVMELED LGAEYLEELL GASDDMTTSA SNSWCSSYHS I

Best Arabidopsis Sequence Match ( AT3G23240.1 )
(BLAST)

001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW

Arabidopsis Description

ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.