Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032433.1-P | Field mustard | nucleus | 96.49 | 96.49 |
| CDY06202 | Canola | nucleus | 96.05 | 95.63 |
| CDY10178 | Canola | nucleus | 75.0 | 76.68 |
| CDY47720 | Canola | nucleus | 65.35 | 75.63 |
| AT1G06160.1 | Thale cress | nucleus | 78.95 | 73.77 |
| CDY23951 | Canola | nucleus | 64.47 | 63.09 |
| CDY72380 | Canola | nucleus | 64.47 | 63.09 |
| CDY10783 | Canola | nucleus | 60.09 | 61.71 |
| CDY24746 | Canola | nucleus | 63.6 | 60.42 |
| CDY15417 | Canola | nucleus | 66.23 | 56.55 |
| GSMUA_Achr4P05520_001 | Banana | nucleus, plastid | 32.89 | 46.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.46 | 45.96 |
| CDY35518 | Canola | nucleus | 42.11 | 45.71 |
| VIT_07s0005g03230.t01 | Wine grape | nucleus | 44.3 | 45.29 |
| OQU84024 | Sorghum | nucleus | 32.89 | 44.64 |
| TraesCS4A01G314600.1 | Wheat | nucleus | 36.4 | 44.38 |
| VIT_07s0005g03260.t01 | Wine grape | nucleus | 43.86 | 44.25 |
| GSMUA_Achr4P12060_001 | Banana | nucleus | 38.6 | 42.72 |
| VIT_07s0005g03270.t01 | Wine grape | nucleus | 39.91 | 40.99 |
| TraesCS2B01G054100.1 | Wheat | nucleus | 35.09 | 40.2 |
| TraesCS2D01G039800.1 | Wheat | nucleus, plastid | 34.21 | 40.0 |
| TraesCS4A01G412200.1 | Wheat | nucleus | 32.89 | 39.27 |
| TraesCS4A01G314500.1 | Wheat | nucleus | 35.53 | 38.76 |
| VIT_07s0005g03280.t01 | Wine grape | nucleus | 36.84 | 38.53 |
| HORVU2Hr1G006370.1 | Barley | nucleus | 27.63 | 38.41 |
| TraesCS1D01G331200.1 | Wheat | nucleus | 39.47 | 38.14 |
| TraesCS5D01G549200.1 | Wheat | nucleus | 40.35 | 37.7 |
| TraesCS4D01G315000.1 | Wheat | nucleus | 34.21 | 37.5 |
| TraesCS5B01G565400.1 | Wheat | nucleus | 37.28 | 37.44 |
| TraesCS2D01G040300.1 | Wheat | nucleus | 33.33 | 37.44 |
| TraesCS2B01G053900.1 | Wheat | nucleus | 33.33 | 37.25 |
| TraesCS1A01G328800.1 | Wheat | plastid | 39.47 | 36.73 |
| TraesCS5B01G565300.1 | Wheat | nucleus | 39.04 | 36.03 |
| TraesCS5B01G308400.1 | Wheat | nucleus | 32.46 | 35.41 |
| HORVU1Hr1G077680.2 | Barley | plastid | 41.23 | 35.34 |
| Os03t0860100-01 | Rice | nucleus | 34.65 | 35.11 |
| TraesCS2A01G041500.1 | Wheat | nucleus | 34.21 | 34.98 |
| TraesCS1B01G342500.1 | Wheat | plastid | 41.23 | 34.94 |
| TraesCS5D01G314900.1 | Wheat | nucleus | 31.58 | 34.45 |
| TraesCS4A01G259200.1 | Wheat | nucleus | 32.89 | 34.09 |
| TraesCS2D01G040100.1 | Wheat | nucleus | 29.82 | 33.83 |
| TraesCS2A01G463400.1 | Wheat | nucleus | 37.28 | 33.73 |
| Os09t0572000-01 | Rice | nucleus | 35.09 | 33.61 |
| TraesCS1D01G331100.1 | Wheat | plastid | 40.79 | 33.33 |
| TraesCS2D01G391400.1 | Wheat | plastid | 40.79 | 33.33 |
| TraesCS2A01G393500.1 | Wheat | plastid | 40.79 | 33.21 |
| TraesCS4A01G326400.1 | Wheat | plastid | 40.79 | 33.21 |
| Zm00001d034920_P001 | Maize | plastid | 41.23 | 32.98 |
| TraesCS2B01G411500.1 | Wheat | plastid | 40.35 | 32.97 |
| TraesCS2D01G464600.1 | Wheat | nucleus | 36.4 | 32.94 |
| TraesCS4D01G310000.1 | Wheat | nucleus | 35.09 | 32.79 |
| Os07t0410700-01 | Rice | nucleus | 34.21 | 32.64 |
| TraesCS2B01G485400.1 | Wheat | nucleus | 35.53 | 32.14 |
| Zm00001d049058_P001 | Maize | nucleus | 34.65 | 32.11 |
| TraesCS4B01G312400.1 | Wheat | nucleus | 34.65 | 32.11 |
| HORVU2Hr1G093660.1 | Barley | nucleus | 40.79 | 31.96 |
| Zm00001d019734_P001 | Maize | nucleus | 35.96 | 31.91 |
| KXG34964 | Sorghum | nucleus | 35.09 | 31.75 |
| TraesCS2B01G485200.1 | Wheat | nucleus | 34.65 | 31.73 |
| TraesCS5D01G314400.1 | Wheat | nucleus | 34.21 | 31.71 |
| EER90462 | Sorghum | plastid | 40.79 | 31.63 |
| TraesCS5B01G539300.1 | Wheat | plastid | 29.82 | 31.48 |
| TraesCS7D01G031300.1 | Wheat | nucleus | 36.84 | 31.46 |
| TraesCS5A01G308000.1 | Wheat | nucleus | 33.77 | 31.17 |
| KXG35152 | Sorghum | nucleus | 36.4 | 30.86 |
| KXG28251 | Sorghum | nucleus | 38.16 | 30.85 |
| TraesCS2A01G041600.1 | Wheat | nucleus | 34.21 | 30.83 |
| TraesCS2D01G464400.1 | Wheat | nucleus | 35.53 | 30.8 |
| TraesCS2D01G040200.1 | Wheat | nucleus | 34.21 | 30.47 |
| HORVU4Hr1G079630.1 | Barley | nucleus | 31.14 | 30.21 |
| Zm00001d019475_P001 | Maize | nucleus | 34.65 | 30.15 |
| HORVU5Hr1G079980.1 | Barley | nucleus | 32.89 | 30.0 |
| HORVU0Hr1G013490.1 | Barley | nucleus | 32.89 | 30.0 |
| KXG28250 | Sorghum | nucleus | 38.16 | 30.0 |
| TraesCS2B01G054000.1 | Wheat | nucleus | 33.77 | 29.62 |
| TraesCS4B01G055500.1 | Wheat | nucleus | 33.77 | 28.84 |
| OQU88654 | Sorghum | nucleus | 33.33 | 27.74 |
| HORVU2Hr1G103660.2 | Barley | nucleus, plastid | 26.32 | 27.52 |
| CDX78856 | Canola | nucleus | 31.14 | 27.41 |
| TraesCS4B01G002000.1 | Wheat | nucleus | 36.84 | 25.45 |
| TraesCS4A01G001300.1 | Wheat | nucleus | 37.28 | 25.0 |
| Zm00001d019096_P001 | Maize | nucleus | 35.53 | 24.62 |
| EES09974 | Sorghum | nucleus | 33.33 | 23.82 |
| HORVU4Hr1G000700.1 | Barley | nucleus | 35.96 | 23.56 |
| Zm00001d019098_P001 | Maize | nucleus | 37.28 | 23.48 |
| EER96030 | Sorghum | nucleus | 33.77 | 22.78 |
| EER98158 | Sorghum | nucleus | 33.77 | 22.65 |
| Os05t0448675-00 | Rice | nucleus | 9.21 | 9.63 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FAD6 | UniProt:A0A078FAD6 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY09984 | ProteinID:CDY09984 | ProteinID:CDY09984.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00031761001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF15 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EF4BCC | SEG:seg | : | : | : | : |
Description
BnaC08g44670DBnaC08g44670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAD6]
Coordinates
chrLK032000:-:353997..354683
Molecular Weight (calculated)
25924.8 Da
IEP (calculated)
4.742
GRAVY (calculated)
-0.712
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYQTSFFYE NQAQEFSPEN SCSTNSWSSQ ESFLWEESFL HDQSFSPSYY SNDFMAFGSS LIKEEEGEDT VAALEEEERS YRGVRKRPWG KYAAEIRDST
101: RKGIRVWLGT FDTAEEAALA YDQAAFALKG DLAVLNFPVD VVRDSLQRMK DVNFDNGESP VIALKRKHSM RNRPRGKKKS YPSSSSSSSS SSKSRIQSVA
201: MKQESTTTLV VFEDLGAEYL EELMRSCS
101: RKGIRVWLGT FDTAEEAALA YDQAAFALKG DLAVLNFPVD VVRDSLQRMK DVNFDNGESP VIALKRKHSM RNRPRGKKKS YPSSSSSSSS SSKSRIQSVA
201: MKQESTTTLV VFEDLGAEYL EELMRSCS
001: MEYQTNFLSG EFSPENSSSS SWSSQESFLW EESFLHQSFD QSFLLSSPTD NYCDDFFAFE SSIIKEEGKE ATVAAEEEEK SYRGVRKRPW GKFAAEIRDS
101: TRKGIRVWLG TFDTAEAAAL AYDQAAFALK GSLAVLNFPA DVVEESLRKM ENVNLNDGES PVIALKRKHS MRNRPRGKKK SSSSSTLTSS PSSSSSYSSS
201: SSSSSLSSRS RKQSVVMTQE SNTTLVVLED LGAEYLEELM RSCS
101: TRKGIRVWLG TFDTAEAAAL AYDQAAFALK GSLAVLNFPA DVVEESLRKM ENVNLNDGES PVIALKRKHS MRNRPRGKKK SSSSSTLTSS PSSSSSYSSS
201: SSSSSLSSRS RKQSVVMTQE SNTTLVVLED LGAEYLEELM RSCS
Arabidopsis Description
ERF094ORA59 [Source:UniProtKB/TrEMBL;Acc:A0A178WAR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.