Factsheet for Os09t0572000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P05520_001	Banana	nucleus, plastid	35.29	52.17
Zm00001d019734_P001	Maize	nucleus	53.36	49.42
KXG35152	Sorghum	nucleus	55.04	48.7
GSMUA_AchrUn_...	Banana	nucleus	32.77	48.45
GSMUA_Achr4P12060_001	Banana	nucleus	40.76	47.09
VIT_07s0005g03230.t01	Wine grape	nucleus	42.02	44.84
VIT_07s0005g03260.t01	Wine grape	nucleus	42.44	44.69
TraesCS4B01G002000.1	Wheat	nucleus	60.08	43.33
Os07t0410700-01	Rice	nucleus	42.86	42.68
TraesCS4A01G001300.1	Wheat	nucleus	60.08	42.06
VIT_07s0005g03270.t01	Wine grape	nucleus	38.24	40.99
HORVU4Hr1G000700.1	Barley	nucleus	57.98	39.66
Os03t0860100-01	Rice	nucleus	36.55	38.67
VIT_07s0005g03280.t01	Wine grape	nucleus	34.03	37.16
CDY10783	Canola	nucleus	34.03	36.49
CDY10178	Canola	nucleus	33.61	35.87
CDY23951	Canola	nucleus	34.45	35.19
CDY72380	Canola	nucleus	34.45	35.19
Bra022832.1-P	Field mustard	nucleus	34.45	35.19
CDY09984	Canola	nucleus	33.61	35.09
Bra032433.1-P	Field mustard	nucleus	33.19	34.65
CDY47720	Canola	nucleus	28.57	34.52
CDY06202	Canola	nucleus	33.19	34.5
Bra018271.1-P	Field mustard	nucleus	34.45	34.17
CDY24746	Canola	nucleus	34.45	34.17
AT2G31230.1	Thale cress	nucleus	34.45	33.74
AT1G06160.1	Thale cress	nucleus	34.45	33.61
Bra015478.1-P	Field mustard	nucleus	33.19	33.47
Bra021712.1-P	Field mustard	nucleus	34.45	30.94
CDY15417	Canola	nucleus	34.45	30.71
Os01t0752500-01	Rice	nucleus	23.53	26.42
Os05t0448675-00	Rice	nucleus	9.24	10.09
Os05t0564700-00	Rice	cytosol	5.46	8.28

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:9266123	EMBL:AK241281	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
UniProt:B7F8P7	ProteinID:BAH94726.1	ProteinID:BAT09531.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os09g0572000	EnsemblPlants:Os09t0572000-01
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF34	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000188AF61	RefSeq:XP_015612362.1	SEG:seg	:	:

Description

ETHYLENE RESPONSE FACTOR 87Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os09t0572000-01)

Coordinates

chr9:+:22847140..22847950

Molecular Weight (calculated)

26049.5 Da

IEP (calculated)

8.493

GRAVY (calculated)

-0.611

Length

238 amino acids

Sequence
(BLAST)

001: MMQPPYTYSN SYHHIHSSLP PEMSDRDVDM HILTALMADM ADSSSSSSSS SSSSSSDDSD MRASAAAAEP EHRRSPAPPP PPRQQQLIGV RKRPWGKFAA
101: EIRDSTRKGA RVWLGTFDSP EAAAMAYDQA AFSVRGASAV LNFPLHRVQE SLQALALGAA GGSPVLALKR RHSIRKRRKP TKHMLLMQQQ QQEPTVVELE
201: DLGADYLEEL LRLSESSSSS SSSSISNFTT TPNRHCQS

Best Arabidopsis Sequence Match ( AT3G23240.1 )
(BLAST)

001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW

Arabidopsis Description

ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.