Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35152 | Sorghum | nucleus | 85.99 | 82.16 |
| Os09t0572000-01 | Rice | nucleus | 49.42 | 53.36 |
| GSMUA_Achr4P05520_001 | Banana | nucleus, plastid | 32.68 | 52.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.91 | 50.93 |
| GSMUA_Achr4P12060_001 | Banana | nucleus | 38.91 | 48.54 |
| Zm00001d049058_P001 | Maize | nucleus | 44.36 | 46.34 |
| VIT_07s0005g03230.t01 | Wine grape | nucleus | 39.69 | 45.74 |
| VIT_07s0005g03260.t01 | Wine grape | nucleus | 39.3 | 44.69 |
| VIT_07s0005g03270.t01 | Wine grape | nucleus | 37.35 | 43.24 |
| TraesCS4B01G002000.1 | Wheat | nucleus | 53.31 | 41.52 |
| Zm00001d019475_P001 | Maize | nucleus | 40.86 | 40.08 |
| TraesCS4A01G001300.1 | Wheat | nucleus | 52.92 | 40.0 |
| CDY10178 | Canola | nucleus | 33.46 | 38.56 |
| HORVU4Hr1G000700.1 | Barley | nucleus | 51.75 | 38.22 |
| CDY47720 | Canola | nucleus | 29.18 | 38.07 |
| CDY10783 | Canola | nucleus | 31.52 | 36.49 |
| VIT_07s0005g03280.t01 | Wine grape | nucleus | 30.74 | 36.24 |
| Bra015478.1-P | Field mustard | nucleus | 33.07 | 36.02 |
| CDY09984 | Canola | nucleus | 31.91 | 35.96 |
| CDY06202 | Canola | nucleus | 31.52 | 35.37 |
| AT1G06160.1 | Thale cress | nucleus | 33.46 | 35.25 |
| Bra022832.1-P | Field mustard | nucleus | 31.91 | 35.19 |
| CDY72380 | Canola | nucleus | 31.91 | 35.19 |
| CDY23951 | Canola | nucleus | 31.91 | 35.19 |
| Bra032433.1-P | Field mustard | nucleus | 31.13 | 35.09 |
| Bra018271.1-P | Field mustard | nucleus | 31.91 | 34.17 |
| CDY24746 | Canola | nucleus | 31.91 | 34.17 |
| AT2G31230.1 | Thale cress | nucleus | 32.3 | 34.16 |
| Zm00001d034920_P001 | Maize | plastid | 36.19 | 32.63 |
| Bra021712.1-P | Field mustard | nucleus | 32.3 | 31.32 |
| CDY15417 | Canola | nucleus | 32.3 | 31.09 |
| Zm00001d019096_P001 | Maize | nucleus | 38.91 | 30.4 |
| Zm00001d019098_P001 | Maize | nucleus | 40.08 | 28.45 |
| Zm00001d039019_P001 | Maize | nucleus | 26.85 | 23.79 |
| Zm00001d009573_P001 | Maize | nucleus | 25.29 | 23.64 |
| Zm00001d043491_P001 | Maize | nucleus | 20.62 | 23.14 |
| Zm00001d012736_P001 | Maize | plastid | 9.34 | 13.33 |
Protein Annotations
| EntrezGene:100191919 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | UniProt:B4FAN6 |
| EMBL:BT034174 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | ProteinID:ONM53680.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF34 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00017B6321 | EnsemblPlantsGene:Zm00001d019734 |
| EnsemblPlants:Zm00001d019734_P001 | EnsemblPlants:Zm00001d019734_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 177Ethylene-responsive transcription factor 1B
Coordinates
chr7:-:54535486..54536259
Molecular Weight (calculated)
27608.9 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.672
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHYDSYLCS GSMHSYGGVG GATDAALDAG GDDMQRLLNA LMDDMAAESD SFSDDMEAAS SESSSSACSA NSQQEATRRP QQQPDGGHSN GSNKSSKKQH
101: QQQSPAPYIG VRKRPWGKFA AEIRDSTRKG ARVWLGTFDS PEAAAMAYDQ AAFSVRGAAA VLNFPVERVQ ESLRALALSS ASSAAGSPVL ALKCRHSIRK
201: RSPNKNKNKK QERQQQVAVA AAGPQQPPCP TSVVELEDLG ADYLDELLRV SSEFHWQ
101: QQQSPAPYIG VRKRPWGKFA AEIRDSTRKG ARVWLGTFDS PEAAAMAYDQ AAFSVRGAAA VLNFPVERVQ ESLRALALSS ASSAAGSPVL ALKCRHSIRK
201: RSPNKNKNKK QERQQQVAVA AAGPQQPPCP TSVVELEDLG ADYLDELLRV SSEFHWQ
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.