Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47720 | Canola | nucleus | 82.96 | 93.91 |
| CDY09984 | Canola | nucleus | 76.68 | 75.0 |
| CDY06202 | Canola | nucleus | 76.23 | 74.24 |
| AT1G06160.1 | Thale cress | nucleus | 76.23 | 69.67 |
| CDY10783 | Canola | nucleus | 61.44 | 61.71 |
| CDY23951 | Canola | nucleus | 63.68 | 60.94 |
| CDY72380 | Canola | nucleus | 63.23 | 60.52 |
| CDY24746 | Canola | nucleus | 62.33 | 57.92 |
| CDY15417 | Canola | nucleus | 65.47 | 54.68 |
| GSMUA_Achr4P05520_001 | Banana | nucleus, plastid | 35.87 | 49.69 |
| CDY35518 | Canola | nucleus | 43.5 | 46.19 |
| OQU84024 | Sorghum | nucleus | 34.53 | 45.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.29 | 44.72 |
| GSMUA_Achr4P12060_001 | Banana | nucleus | 41.26 | 44.66 |
| VIT_07s0005g03230.t01 | Wine grape | nucleus | 43.95 | 43.95 |
| TraesCS4A01G314600.1 | Wheat | nucleus | 36.77 | 43.85 |
| VIT_07s0005g03260.t01 | Wine grape | nucleus | 43.5 | 42.92 |
| TraesCS2D01G039800.1 | Wheat | nucleus, plastid | 35.87 | 41.03 |
| TraesCS4A01G412200.1 | Wheat | nucleus | 34.98 | 40.84 |
| VIT_07s0005g03270.t01 | Wine grape | nucleus | 40.36 | 40.54 |
| TraesCS2B01G054100.1 | Wheat | nucleus | 34.53 | 38.69 |
| TraesCS4A01G314500.1 | Wheat | nucleus | 35.87 | 38.28 |
| HORVU2Hr1G006370.1 | Barley | nucleus | 27.8 | 37.8 |
| TraesCS4D01G315000.1 | Wheat | nucleus | 34.98 | 37.5 |
| TraesCS2D01G040300.1 | Wheat | nucleus | 34.08 | 37.44 |
| TraesCS2B01G053900.1 | Wheat | nucleus | 34.08 | 37.25 |
| VIT_07s0005g03280.t01 | Wine grape | nucleus | 36.32 | 37.16 |
| TraesCS5B01G308400.1 | Wheat | nucleus | 34.53 | 36.84 |
| TraesCS5D01G549200.1 | Wheat | nucleus | 39.91 | 36.48 |
| TraesCS1D01G331200.1 | Wheat | nucleus | 38.56 | 36.44 |
| Os03t0860100-01 | Rice | nucleus | 36.32 | 36.0 |
| TraesCS5B01G565400.1 | Wheat | nucleus | 36.32 | 35.68 |
| TraesCS4A01G259200.1 | Wheat | nucleus | 34.98 | 35.45 |
| TraesCS2A01G041500.1 | Wheat | nucleus | 35.43 | 35.43 |
| TraesCS5D01G314900.1 | Wheat | nucleus | 33.18 | 35.41 |
| Os07t0410700-01 | Rice | nucleus | 37.67 | 35.15 |
| TraesCS1A01G328800.1 | Wheat | plastid | 38.56 | 35.1 |
| TraesCS4D01G310000.1 | Wheat | nucleus | 37.67 | 34.43 |
| TraesCS5B01G565300.1 | Wheat | nucleus | 38.12 | 34.41 |
| HORVU1Hr1G077680.2 | Barley | plastid | 40.81 | 34.21 |
| Zm00001d049058_P001 | Maize | nucleus | 37.67 | 34.15 |
| TraesCS4B01G312400.1 | Wheat | nucleus | 37.22 | 33.74 |
| Os09t0572000-01 | Rice | nucleus | 35.87 | 33.61 |
| Zm00001d019734_P001 | Maize | nucleus | 38.56 | 33.46 |
| TraesCS1B01G342500.1 | Wheat | plastid | 40.36 | 33.46 |
| TraesCS2B01G411500.1 | Wheat | plastid | 41.7 | 33.33 |
| TraesCS2D01G040100.1 | Wheat | nucleus | 30.04 | 33.33 |
| TraesCS2D01G391400.1 | Wheat | plastid | 41.26 | 32.97 |
| KXG34964 | Sorghum | nucleus | 37.22 | 32.94 |
| TraesCS2A01G393500.1 | Wheat | plastid | 41.26 | 32.86 |
| Zm00001d034920_P001 | Maize | plastid | 41.7 | 32.63 |
| TraesCS2A01G463400.1 | Wheat | nucleus | 36.77 | 32.54 |
| TraesCS2D01G464600.1 | Wheat | nucleus | 36.77 | 32.54 |
| TraesCS5D01G314400.1 | Wheat | nucleus | 35.87 | 32.52 |
| TraesCS4A01G326400.1 | Wheat | plastid | 40.81 | 32.5 |
| TraesCS7D01G031300.1 | Wheat | nucleus | 38.56 | 32.21 |
| TraesCS2B01G485200.1 | Wheat | nucleus | 35.87 | 32.13 |
| TraesCS5A01G308000.1 | Wheat | nucleus | 35.43 | 31.98 |
| EER90462 | Sorghum | plastid | 42.15 | 31.97 |
| KXG35152 | Sorghum | nucleus | 38.56 | 31.97 |
| KXG28251 | Sorghum | nucleus | 40.36 | 31.91 |
| TraesCS2B01G485400.1 | Wheat | nucleus | 35.87 | 31.75 |
| Zm00001d019475_P001 | Maize | nucleus | 37.22 | 31.68 |
| TraesCS2D01G040200.1 | Wheat | nucleus | 36.32 | 31.64 |
| TraesCS2A01G041600.1 | Wheat | nucleus | 35.87 | 31.62 |
| HORVU2Hr1G093660.1 | Barley | nucleus | 41.26 | 31.62 |
| HORVU0Hr1G013490.1 | Barley | nucleus | 35.43 | 31.6 |
| HORVU5Hr1G079980.1 | Barley | nucleus | 35.43 | 31.6 |
| TraesCS1D01G331100.1 | Wheat | plastid | 39.46 | 31.54 |
| HORVU4Hr1G079630.1 | Barley | nucleus | 32.74 | 31.06 |
| KXG28250 | Sorghum | nucleus | 40.36 | 31.03 |
| TraesCS5B01G539300.1 | Wheat | plastid | 30.04 | 31.02 |
| TraesCS2B01G054000.1 | Wheat | nucleus | 35.87 | 30.77 |
| TraesCS2D01G464400.1 | Wheat | nucleus | 35.87 | 30.42 |
| OQU88654 | Sorghum | nucleus | 37.22 | 30.29 |
| TraesCS4B01G055500.1 | Wheat | nucleus | 35.87 | 29.96 |
| HORVU2Hr1G103660.2 | Barley | nucleus, plastid | 27.35 | 27.98 |
| CDX78856 | Canola | nucleus | 30.49 | 26.25 |
| TraesCS4B01G002000.1 | Wheat | nucleus | 38.56 | 26.06 |
| TraesCS4A01G001300.1 | Wheat | nucleus | 38.56 | 25.29 |
| Zm00001d019096_P001 | Maize | nucleus | 35.87 | 24.32 |
| HORVU4Hr1G000700.1 | Barley | nucleus | 37.22 | 23.85 |
| EES09974 | Sorghum | nucleus | 34.08 | 23.82 |
| EER98158 | Sorghum | nucleus | 35.43 | 23.24 |
| EER96030 | Sorghum | nucleus | 34.98 | 23.08 |
| Zm00001d019098_P001 | Maize | nucleus | 37.22 | 22.93 |
| Os05t0448675-00 | Rice | nucleus | 9.42 | 9.63 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FDN2 | UniProt:A0A078FDN2 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY10178 | ProteinID:CDY10178 | ProteinID:CDY10178.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00031993001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF15 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EF34FD | SEG:seg | : | : |
Description
BnaC05g04210DBnaC05g04210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDN2]
Coordinates
chrLK032001:+:400554..401288
Molecular Weight (calculated)
25354.0 Da
IEP (calculated)
4.419
GRAVY (calculated)
-0.630
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFQTNFFSE NQSQDSSTTT SWSSQESFLW EDNFLHDQSF LSAVSPSYYF DDFSTFEESL IKEEEDATVA ANKQEEERSY RGVRKRPWGK YAAEIRDSTR
101: KGIRVWLGTF DTAEEAALAY DQAAFALKGD LAVLNFPVEV VKESLWNMEN VNFNDGESPV IALKRKHSMR NRPRGKKKSS PSSSSSFLSS TSSSSVVTNQ
201: ETEVVVFEDL GAEYLEELMR LCS
101: KGIRVWLGTF DTAEEAALAY DQAAFALKGD LAVLNFPVEV VKESLWNMEN VNFNDGESPV IALKRKHSMR NRPRGKKKSS PSSSSSFLSS TSSSSVVTNQ
201: ETEVVVFEDL GAEYLEELMR LCS
001: MEYQTNFLSG EFSPENSSSS SWSSQESFLW EESFLHQSFD QSFLLSSPTD NYCDDFFAFE SSIIKEEGKE ATVAAEEEEK SYRGVRKRPW GKFAAEIRDS
101: TRKGIRVWLG TFDTAEAAAL AYDQAAFALK GSLAVLNFPA DVVEESLRKM ENVNLNDGES PVIALKRKHS MRNRPRGKKK SSSSSTLTSS PSSSSSYSSS
201: SSSSSLSSRS RKQSVVMTQE SNTTLVVLED LGAEYLEELM RSCS
101: TRKGIRVWLG TFDTAEAAAL AYDQAAFALK GSLAVLNFPA DVVEESLRKM ENVNLNDGES PVIALKRKHS MRNRPRGKKK SSSSSTLTSS PSSSSSYSSS
201: SSSSSLSSRS RKQSVVMTQE SNTTLVVLED LGAEYLEELM RSCS
Arabidopsis Description
ERF094ORA59 [Source:UniProtKB/TrEMBL;Acc:A0A178WAR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.