Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G079980.1 | Barley | nucleus | 100.0 | 100.0 |
| TraesCS5D01G314900.1 | Wheat | nucleus | 73.2 | 87.56 |
| TraesCS5A01G308000.1 | Wheat | nucleus | 85.6 | 86.64 |
| TraesCS5B01G308400.1 | Wheat | nucleus | 72.0 | 86.12 |
| HORVU4Hr1G079630.1 | Barley | nucleus | 56.8 | 60.43 |
| GSMUA_Achr4P05520_001 | Banana | nucleus, plastid | 30.0 | 46.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.6 | 45.96 |
| GSMUA_Achr4P12060_001 | Banana | nucleus | 35.2 | 42.72 |
| HORVU2Hr1G006370.1 | Barley | nucleus | 27.2 | 41.46 |
| VIT_07s0005g03230.t01 | Wine grape | nucleus | 33.6 | 37.67 |
| OQU88654 | Sorghum | nucleus | 41.2 | 37.59 |
| VIT_07s0005g03270.t01 | Wine grape | nucleus | 33.2 | 37.39 |
| VIT_07s0005g03260.t01 | Wine grape | nucleus | 33.2 | 36.73 |
| Zm00001d019096_P001 | Maize | nucleus | 47.6 | 36.17 |
| HORVU1Hr1G077680.2 | Barley | plastid | 38.0 | 35.71 |
| CDY10783 | Canola | nucleus | 31.6 | 35.59 |
| EER96030 | Sorghum | nucleus | 48.0 | 35.5 |
| CDY10178 | Canola | nucleus | 31.6 | 35.43 |
| CDY47720 | Canola | nucleus | 27.6 | 35.03 |
| EER98158 | Sorghum | nucleus | 47.6 | 35.0 |
| EES09974 | Sorghum | nucleus | 44.0 | 34.48 |
| AT2G31230.1 | Thale cress | nucleus | 32.8 | 33.74 |
| VIT_07s0005g03280.t01 | Wine grape | nucleus | 29.2 | 33.49 |
| CDY23951 | Canola | nucleus | 31.2 | 33.48 |
| Bra022832.1-P | Field mustard | nucleus | 31.2 | 33.48 |
| CDY72380 | Canola | nucleus | 31.2 | 33.48 |
| Bra015478.1-P | Field mustard | nucleus | 31.2 | 33.05 |
| CDY24746 | Canola | nucleus | 31.6 | 32.92 |
| Bra018271.1-P | Field mustard | nucleus | 31.6 | 32.92 |
| CDY09984 | Canola | nucleus | 30.0 | 32.89 |
| Bra032433.1-P | Field mustard | nucleus | 30.0 | 32.89 |
| CDY06202 | Canola | nucleus | 30.0 | 32.75 |
| Zm00001d019098_P001 | Maize | nucleus | 47.2 | 32.6 |
| AT1G06160.1 | Thale cress | nucleus | 31.6 | 32.38 |
| HORVU2Hr1G093660.1 | Barley | nucleus | 37.6 | 32.3 |
| HORVU2Hr1G103660.2 | Barley | nucleus, plastid | 27.6 | 31.65 |
| Bra021712.1-P | Field mustard | nucleus | 33.2 | 31.32 |
| CDY15417 | Canola | nucleus | 33.2 | 31.09 |
| HORVU4Hr1G000700.1 | Barley | nucleus | 41.6 | 29.89 |
| Os05t0448675-00 | Rice | nucleus | 16.0 | 18.35 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU0Hr1G013490 | EnsemblPlants:HORVU0Hr1G013490.1 | InterPro:IPR001471 |
| InterPro:IPR036955 | UniProt:M0Z5B9 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF34 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000296BC07 | SEG:seg | : |
Description
No Description!
Coordinates
chrchrUn:-:76781696..76782448
Molecular Weight (calculated)
26581.2 Da
IEP (calculated)
8.329
GRAVY (calculated)
-0.340
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MELPAGDHSY YHGYSISFSS GTPQYTHHRR APQARARSDM EVDHQRLSFL MEATCITSND YGSPPLQGTR PAPGDHSGGS EFMATPVAWL AVEAQGSSSG
101: SCSAPESPLI GVRKRPWGKY AAEIRDSTRN GARVWLGTFD TPHAAALAYD QAAFSVRGPA AVLNFPIKVV QESLRALGIG GNAAAGDSPA LALKRRHCIR
201: KRNPKNKRRT GTAATAATGV GAASALSTCV LELEDLGADY LEELLTLSDL
101: SCSAPESPLI GVRKRPWGKY AAEIRDSTRN GARVWLGTFD TPHAAALAYD QAAFSVRGPA AVLNFPIKVV QESLRALGIG GNAAAGDSPA LALKRRHCIR
201: KRNPKNKRRT GTAATAATGV GAASALSTCV LELEDLGADY LEELLTLSDL
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.