Factsheet for TraesCS2A01G393500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G391400.1	Wheat	plastid	93.93	94.27
TraesCS2B01G411500.1	Wheat	plastid	93.57	93.91
HORVU2Hr1G093660.1	Barley	nucleus	90.36	86.94
TraesCS4A01G326400.1	Wheat	plastid	74.29	74.29
TraesCS1A01G328800.1	Wheat	plastid	62.86	71.84
TraesCS4A01G314600.1	Wheat	nucleus	47.86	71.66
TraesCS4A01G314500.1	Wheat	nucleus	52.14	69.86
GSMUA_Achr4P05520_001	Banana	nucleus, plastid	33.57	58.39
GSMUA_Achr4P12060_001	Banana	nucleus	38.93	52.91
GSMUA_AchrUn_...	Banana	nucleus	30.36	52.8
VIT_07s0005g03230.t01	Wine grape	nucleus	40.0	50.22
Os03t0860100-01	Rice	nucleus	40.0	49.78
VIT_07s0005g03260.t01	Wine grape	nucleus	40.0	49.56
Zm00001d034920_P001	Maize	plastid	48.93	48.07
EER90462	Sorghum	plastid	49.64	47.28
TraesCS4A01G412200.1	Wheat	nucleus	30.36	44.5
VIT_07s0005g03270.t01	Wine grape	nucleus	34.64	43.69
CDY10783	Canola	nucleus	32.86	41.44
VIT_07s0005g03280.t01	Wine grape	nucleus	32.14	41.28
CDY10178	Canola	nucleus	32.86	41.26
CDY09984	Canola	nucleus	33.21	40.79
CDY47720	Canola	nucleus	28.57	40.61
Bra032433.1-P	Field mustard	nucleus	32.86	40.35
CDY06202	Canola	nucleus	32.86	40.17
TraesCS4A01G259200.1	Wheat	nucleus	31.07	39.55
CDY72380	Canola	nucleus	32.86	39.48
Bra022832.1-P	Field mustard	nucleus	32.86	39.48
CDY23951	Canola	nucleus	32.5	39.06
TraesCS2A01G463400.1	Wheat	nucleus	35.0	38.89
Bra018271.1-P	Field mustard	nucleus	33.21	38.75
CDY24746	Canola	nucleus	33.21	38.75
AT2G31230.1	Thale cress	nucleus	33.57	38.68
TraesCS2A01G041500.1	Wheat	nucleus	30.71	38.56
Bra015478.1-P	Field mustard	nucleus	32.5	38.56
AT1G06160.1	Thale cress	nucleus	33.21	38.11
TraesCS5A01G308000.1	Wheat	nucleus	32.86	37.25
Bra021712.1-P	Field mustard	nucleus	33.57	35.47
CDY15417	Canola	nucleus	33.57	35.21
TraesCS2A01G041600.1	Wheat	nucleus	31.07	34.39
TraesCS3A01G291400.1	Wheat	nucleus	21.43	32.26
TraesCS4A01G001300.1	Wheat	nucleus	33.93	27.94
TraesCS1A01G399500.1	Wheat	nucleus	24.64	23.79

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF67	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2A01G393500	EnsemblPlants:TraesCS2A01G393500.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:643230342..643231184

Molecular Weight (calculated)

30062.0 Da

IEP (calculated)

6.864

GRAVY (calculated)

-0.479

Length

280 amino acids

Sequence
(BLAST)

001: MSDPSSTASS YSTSPRLTTG VVNFLARRAM TTQNHHRAAA SLHSPGSSTG SADTAPWHYR APATPPPLLP FDANDADEML LLDMLSQHQE DMHTDTATAP
101: VPTTTAATAV KREVSEEVEA KVAVGGSRRA FRGVRKRPWG KFAAEIRDST RDGVRVWLGT FDSPEEAALA YDQAAFAMRG GAAVLNFPAD QVRRSLEGAG
201: DDVCGRADGL SPVLALKRRH SMHRRASTTR KASRAVRTGR PEGVMELEDL GAEYLEELLG ASDDMTTSAS SSWCSGHHSI

Best Arabidopsis Sequence Match ( AT3G23240.1 )
(BLAST)

001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW

Arabidopsis Description

ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.