Factsheet for TraesCS1A01G399500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G427600.1	Wheat	nucleus	92.07	92.07
TraesCS1D01G407100.1	Wheat	nucleus	90.69	90.69
Os05t0564700-00	Rice	cytosol	28.97	53.5
KXG22538	Sorghum	nucleus	52.41	53.15
Zm00001d039019_P001	Maize	nucleus	52.07	52.07
Zm00001d009573_P001	Maize	nucleus	46.21	48.73
KRH21337	Soybean	nucleus	33.45	36.6
VIT_10s0003g00590.t01	Wine grape	nucleus	33.79	35.38
KRH10963	Soybean	nucleus	32.41	35.34
PGSC0003DMT400027839	Potato	nucleus	28.97	32.18
Solyc02g077360.1.1	Tomato	nucleus	28.62	32.17
TraesCS4A01G412200.1	Wheat	nucleus	21.03	31.94
TraesCS2A01G041500.1	Wheat	nucleus	23.45	30.49
TraesCS4A01G314600.1	Wheat	nucleus	19.31	29.95
TraesCS4A01G314500.1	Wheat	nucleus	21.38	29.67
TraesCS4A01G259200.1	Wheat	nucleus	22.41	29.55
TraesCS3A01G291400.1	Wheat	nucleus	18.28	28.49
CDX78856	Canola	nucleus	25.17	28.19
TraesCS5A01G308000.1	Wheat	nucleus	23.45	27.53
TraesCS1A01G328800.1	Wheat	plastid	23.1	27.35
TraesCS2A01G041600.1	Wheat	nucleus	23.1	26.48
TraesCS4A01G326400.1	Wheat	plastid	24.14	25.0
Bra013310.1-P	Field mustard	nucleus	25.86	24.67
TraesCS2A01G393500.1	Wheat	plastid	23.79	24.64
TraesCS2A01G463400.1	Wheat	nucleus	21.03	24.21
AT4G18450.1	Thale cress	nucleus	23.79	22.77
TraesCS4A01G001300.1	Wheat	nucleus	23.79	20.29

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF16	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS1A01G399500	EnsemblPlants:TraesCS1A01G399500.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr1A:-:564039971..564040843

Molecular Weight (calculated)

31499.1 Da

IEP (calculated)

8.466

GRAVY (calculated)

-0.451

Length

290 amino acids

Sequence
(BLAST)

001: MAIGAPGSSQ QPRDTSNILE NVWATIMTEA PTGCTPMPAS SSTASTSLVD QAGAEILQRL PSLGRWISMG ADEWDELLSV ADAATPPIAE QPPLAVASPR
101: GEGQQQSAVL GKVALPKSYR GVRRRPWGKF AAEIRDTRRR GARVWLGTFA TADEAALAYD VAALRMRGPR AHLNFPIEKV QRRLDLERDN GQFLDAGDHS
201: TGRARRKRMR RSGATATDHA RTVDADLTAV YGNGSSDQMV SFASSRRDHG TPTVQDRRVM SADVGGAVNR VIEVEEIGSE YWDYLFPPLV

Best Arabidopsis Sequence Match ( AT4G18450.1 )
(BLAST)

001: MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS
101: SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR
201: KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL
301: SSF

Arabidopsis Description

ERF091Ethylene-responsive transcription factor ERF091 [Source:UniProtKB/Swiss-Prot;Acc:O49515]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.