Factsheet for VIT_10s0003g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10963	Soybean	nucleus	53.79	56.02
KRH21337	Soybean	nucleus	53.43	55.85
Solyc02g077360.1.1	Tomato	nucleus	49.1	52.71
PGSC0003DMT400027839	Potato	nucleus	48.74	51.72
VIT_14s0081g00730.t01	Wine grape	nucleus	28.16	37.5
KXG22538	Sorghum	nucleus	37.91	36.71
VIT_05s0049g00510.t01	Wine grape	nucleus	27.44	36.54
Zm00001d009573_P001	Maize	nucleus	36.1	36.36
CDX78856	Canola	nucleus	32.85	35.14
TraesCS1D01G407000.1	Wheat	nucleus	34.66	34.41
VIT_07s0005g03270.t01	Wine grape	nucleus	27.44	34.23
VIT_07s0005g03230.t01	Wine grape	nucleus	27.44	34.08
TraesCS1B01G427500.1	Wheat	nucleus	34.66	34.04
Zm00001d039019_P001	Maize	nucleus	35.38	33.79
TraesCS1A01G399500.1	Wheat	nucleus	35.38	33.79
TraesCS1D01G407100.1	Wheat	nucleus	35.02	33.45
VIT_07s0005g03260.t01	Wine grape	nucleus	27.08	33.19
VIT_07s0005g03280.t01	Wine grape	nucleus	25.99	33.03
TraesCS1B01G427600.1	Wheat	nucleus	34.3	32.76
AT4G18450.1	Thale cress	nucleus	32.85	30.03
Bra013310.1-P	Field mustard	nucleus	32.49	29.61
Os05t0564700-00	Rice	cytosol	16.25	28.66

Protein Annotations

EntrezGene:100241795	wikigene:100241795	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:CCB55646	ProteinID:CCB55646.1	InterPro:DNA-bd_dom_sf	UniProt:F6HM58	EMBL:FN595992	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EntrezGene:LOC100241795
wikigene:LOC100241795	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF16
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00015CCAED	ArrayExpress:VIT_10s0003g00590	EnsemblPlantsGene:VIT_10s0003g00590	EnsemblPlants:VIT_10s0003g00590.t01
RefSeq:XP_002273121	RefSeq:XP_002273121.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:1825699..1826751

Molecular Weight (calculated)

30529.6 Da

IEP (calculated)

4.903

GRAVY (calculated)

-0.588

Length

277 amino acids

Sequence
(BLAST)

001: MATGGDPHAE SEAMLENVWA SFIGGAEFSG ETEKTPELSK AWEGLPCLDG RDGSMEILQR LPSLGRWISM GAETWEELLD STIPERNTEQ SCNHDLESST
101: TSSISGTKVN AMKTEKVASP HYRGVRRRPW GKYAAEIRDS TRKGARVWLG TFETAEEAAL AYDKAALRIR GAKAYLNFPL ETVARARGIA CSGKGLSYSS
201: TASQAYGSAS PILGCNERIS NPRKRPSTNW EENNEVKMEK PPSKKMASLE DVYWNEFDVL EFPDLGSDYL DSLLSSI

Best Arabidopsis Sequence Match ( AT4G18450.1 )
(BLAST)

001: MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS
101: SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR
201: KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL
301: SSF

Arabidopsis Description

ERF091Ethylene-responsive transcription factor ERF091 [Source:UniProtKB/Swiss-Prot;Acc:O49515]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.