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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039019_P001 Maize nucleus 83.22 82.07
Zm00001d009573_P001 Maize nucleus 75.52 78.55
Os05t0564700-00 Rice cytosol 32.87 59.87
TraesCS1D01G407000.1 Wheat nucleus 52.8 54.12
TraesCS1A01G399500.1 Wheat nucleus 53.15 52.41
TraesCS1B01G427500.1 Wheat nucleus 51.05 51.77
TraesCS1B01G427600.1 Wheat nucleus 52.1 51.38
TraesCS1D01G407100.1 Wheat nucleus 51.75 51.03
KRH21337 Soybean nucleus 36.71 39.62
KRH10963 Soybean nucleus 36.36 39.1
VIT_10s0003g00590.t01 Wine grape nucleus 36.71 37.91
Solyc02g077360.1.1 Tomato nucleus 33.22 36.82
PGSC0003DMT400027839 Potato nucleus 32.87 36.02
OQU84024 Sorghum nucleus 20.28 34.52
CDX78856 Canola nucleus 26.57 29.34
KXG34964 Sorghum nucleus 24.48 27.78
KXG33377 Sorghum plastid 21.68 27.56
KXG35152 Sorghum nucleus 23.78 25.28
Bra013310.1-P Field mustard nucleus 26.22 24.67
KXG28251 Sorghum nucleus 23.78 24.11
AT4G18450.1 Thale cress nucleus 25.52 24.09
OQU88654 Sorghum nucleus 23.08 24.09
EER90462 Sorghum plastid 23.43 22.79
KXG28250 Sorghum nucleus 23.08 22.76
EES09974 Sorghum nucleus 22.73 20.38
EER96030 Sorghum nucleus 23.78 20.12
EER98158 Sorghum nucleus 23.78 20.0
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10UniProt:A0A1B6PA26InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sf
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955
EnsemblPlants:KXG22538ProteinID:KXG22538ProteinID:KXG22538.1PFAM:PF00847PRINTS:PR00367PFscan:PS51032
PANTHER:PTHR31677PANTHER:PTHR31677:SF16SMART:SM00380EnsemblPlantsGene:SORBI_3009G233100SUPFAM:SSF54171UniParc:UPI0003C67E3A
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:-:57272692..57273552
Molecular Weight (calculated)
30263.3 Da
IEP (calculated)
8.077
GRAVY (calculated)
-0.438
Length
286 amino acids
Sequence
(BLAST)
001: MAIGAPPDDS RQRPAADQAA NILENVWATI IAGSATPASS STAASSEVGE ERPPEAILER LPSLGRWISM GAEEWDELLL SGTAALASGA AASGELLAAS
101: PANQEADRQH GNRATSSSKA AAAACKSYRG VRRRPWGKFA AEIRDTRRKG ARVWLGTFAT ADEAALAYDK AALRMRGPRA HLNFPLDVVQ REMQAAAAGD
201: GCAGTTRVLR RKRRRSNHDA ATADGTRSHG SVAAGTGRDP TMVSFACAKK DQGTPPSIVQ ERSISDPGAV IEFEDIGGEY WDYLFT
Best Arabidopsis Sequence Match ( AT4G18450.1 )
(BLAST)
001: MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS
101: SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR
201: KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL
301: SSF
Arabidopsis Description
ERF091Ethylene-responsive transcription factor ERF091 [Source:UniProtKB/Swiss-Prot;Acc:O49515]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.