Factsheet for PGSC0003DMT400027839

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g077360.1.1	Tomato	nucleus	90.04	91.09
KRH10963	Soybean	nucleus	50.96	50.0
KRH21337	Soybean	nucleus	49.81	49.06
VIT_10s0003g00590.t01	Wine grape	nucleus	51.72	48.74
PGSC0003DMT400034489	Potato	nucleus	25.67	39.41
PGSC0003DMT400034490	Potato	nucleus	24.9	38.46
PGSC0003DMT400037877	Potato	nucleus	22.61	37.11
PGSC0003DMT400034487	Potato	nucleus	24.9	36.52
PGSC0003DMT400026627	Potato	nucleus	26.82	35.53
PGSC0003DMT400035406	Potato	nucleus	23.37	35.06
PGSC0003DMT400036837	Potato	nucleus	27.2	34.63
KXG22538	Sorghum	nucleus	36.02	32.87
PGSC0003DMT400092292	Potato	nucleus	25.29	32.84
PGSC0003DMT400095521	Potato	nucleus	24.9	32.83
Zm00001d009573_P001	Maize	nucleus	34.1	32.36
PGSC0003DMT400034873	Potato	nucleus	27.2	32.13
Zm00001d039019_P001	Maize	nucleus	35.63	32.07
TraesCS1D01G407100.1	Wheat	nucleus	32.57	29.31
PGSC0003DMT400044379	Potato	nucleus	26.82	29.05
TraesCS1A01G399500.1	Wheat	nucleus	32.18	28.97
TraesCS1B01G427600.1	Wheat	nucleus	32.18	28.97
TraesCS1D01G407000.1	Wheat	nucleus	30.65	28.67
PGSC0003DMT400037826	Potato	nucleus	24.52	28.44
TraesCS1B01G427500.1	Wheat	nucleus	30.65	28.37
PGSC0003DMT400040921	Potato	nucleus	15.33	26.14
PGSC0003DMT400060732	Potato	nucleus	26.82	25.09
Os05t0564700-00	Rice	cytosol	13.03	21.66

Protein Annotations

EntrezGene:107058986	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
UniProt:M1AQ89	PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400010719	PGSC:PGSC0003DMG400010719	EnsemblPlants:PGSC0003DMT400027839	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF16	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295D300
RefSeq:XP_015160785.1	SEG:seg	:	:	:	:

Description

AP2/ERF domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400010719]

Coordinates

chr2:+:32830969..32831754

Molecular Weight (calculated)

30343.4 Da

IEP (calculated)

4.570

GRAVY (calculated)

-0.854

Length

261 amino acids

Sequence
(BLAST)

001: MTTHVEKNNQ QQDQVACEEI LENVWANFIS KNDQNSQKVT NEYCCEQYWE QLPILERLPS LGRWISMGAE TWEDILDGII IPPQDNKNSN DESTNKDDED
101: VVNVEKKKMV INNTRHYRGV RRRPWGKYAA EIRDSSRKGA RVWLGTFNTA EEAAMAYDKA ALRIRGPKAY LNFPYEIVAQ AMGISNCPNE KEWTFSSSSQ
201: YNSRKRVSRD WNMNENLDEI NQLPKEKKIM RSMEEDLLND LDILEFEDLG SDYLDGLLSS L

Best Arabidopsis Sequence Match ( AT4G18450.1 )
(BLAST)

001: MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS
101: SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR
201: KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL
301: SSF

Arabidopsis Description

ERF091Ethylene-responsive transcription factor ERF091 [Source:UniProtKB/Swiss-Prot;Acc:O49515]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.