Factsheet for PGSC0003DMT400034487

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g011740.1.1	Tomato	nucleus	88.2	89.2
PGSC0003DMT400034490	Potato	nucleus	53.37	56.21
PGSC0003DMT400034489	Potato	nucleus	52.81	55.29
PGSC0003DMT400037877	Potato	nucleus	44.94	50.31
KRH32176	Soybean	nucleus	46.07	47.4
KRH19551	Soybean	nucleus	41.57	41.57
PGSC0003DMT400035406	Potato	nucleus	39.89	40.8
PGSC0003DMT400092292	Potato	nucleus	46.07	40.8
KRH19550	Soybean	nucleus	44.38	39.3
PGSC0003DMT400026627	Potato	nucleus	43.26	39.09
PGSC0003DMT400095521	Potato	nucleus	42.7	38.38
PGSC0003DMT400037826	Potato	nucleus	48.31	38.22
PGSC0003DMT400036837	Potato	nucleus	43.82	38.05
KRG95655	Soybean	nucleus	44.38	37.8
KRH19549	Soybean	nucleus	45.51	36.82
KRH19548	Soybean	nucleus	43.26	36.15
PGSC0003DMT400034873	Potato	nucleus	44.38	35.75
PGSC0003DMT400044379	Potato	nucleus	46.63	34.44
PGSC0003DMT400040921	Potato	nucleus	26.97	31.37
PGSC0003DMT400060732	Potato	nucleus	47.75	30.47
PGSC0003DMT400027839	Potato	nucleus	36.52	24.9

Protein Annotations

EntrezGene:107061527	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	UniProt:M1B0S2	PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400013255	PGSC:PGSC0003DMG400013255	EnsemblPlants:PGSC0003DMT400034487
PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF35	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0002965463	RefSeq:XP_015166367.1	SEG:seg	:	:

Description

ERF transcription factor 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400013255]

Coordinates

chr11:-:1002200..1002736

Molecular Weight (calculated)

20181.5 Da

IEP (calculated)

4.980

GRAVY (calculated)

-0.863

Length

178 amino acids

Sequence
(BLAST)

001: MNHSFSIETS SYDEEIKIKD EEEEIITFNN NNIIQDQENT QKGKQYIGVR KRPWGKYAAE IRDSTRNGIR VWLGTFDTAE EAALAYDQAA LSMRGPSTCL
101: NFQVEVVQES LRGFNYNSQE GSTSSPAEVI KEKHKKRNSK GKKTIKSNKE QNNNVLVLED LGPDLLDELL SSKCSTLE

Best Arabidopsis Sequence Match ( AT4G18450.1 )
(BLAST)

001: MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS
101: SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR
201: KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL
301: SSF

Arabidopsis Description

ERF091Ethylene-responsive transcription factor ERF091 [Source:UniProtKB/Swiss-Prot;Acc:O49515]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.