Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32176 | Soybean | nucleus | 82.02 | 84.39 |
| KRH19550 | Soybean | nucleus | 82.58 | 73.13 |
| KRH19549 | Soybean | nucleus | 84.27 | 68.18 |
| KRH19548 | Soybean | nucleus | 74.16 | 61.97 |
| KRH31709 | Soybean | nucleus | 46.63 | 49.7 |
| PGSC0003DMT400034489 | Potato | nucleus | 42.7 | 44.71 |
| Solyc11g011750.1.1 | Tomato | nucleus | 41.57 | 44.58 |
| KRH69130 | Soybean | nucleus | 50.0 | 43.84 |
| PGSC0003DMT400034490 | Potato | nucleus | 41.57 | 43.79 |
| PGSC0003DMT400037877 | Potato | nucleus | 38.76 | 43.4 |
| KRG95655 | Soybean | nucleus | 48.88 | 41.63 |
| PGSC0003DMT400034487 | Potato | nucleus | 41.57 | 41.57 |
| Solyc11g011740.1.1 | Tomato | nucleus | 41.01 | 41.48 |
| KRG97053 | Soybean | nucleus | 44.38 | 40.1 |
| KRG92311 | Soybean | nucleus | 47.75 | 39.72 |
| KRH34483 | Soybean | nucleus | 46.63 | 37.9 |
| PGSC0003DMT400092292 | Potato | nucleus | 42.7 | 37.81 |
| Solyc05g051180.1.1 | Tomato | nucleus | 42.7 | 36.19 |
| PGSC0003DMT400037826 | Potato | nucleus | 45.51 | 36.0 |
| Solyc05g051200.1.1 | Tomato | nucleus | 44.38 | 35.27 |
| KRH67371 | Soybean | nucleus | 45.51 | 33.47 |
| KRG95657 | Soybean | nucleus | 46.63 | 32.81 |
| Solyc04g014530.1.1 | Tomato | nucleus | 41.57 | 31.76 |
| KRG95654 | Soybean | nucleus | 33.15 | 31.22 |
| KRH67369 | Soybean | nucleus | 40.45 | 31.17 |
| KRH19553 | Soybean | nucleus | 44.94 | 30.89 |
| KRH32180 | Soybean | nucleus | 44.94 | 29.63 |
| PGSC0003DMT400060732 | Potato | nucleus | 41.01 | 26.16 |
| KRH10963 | Soybean | nucleus | 34.27 | 22.93 |
| KRH21337 | Soybean | nucleus | 33.71 | 22.64 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02008186 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_13G122900 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1LYJ6 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH19551 | ProteinID:KRH19551 | ProteinID:KRH19551.1 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF67 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295BF55 | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:23603012..23603548
Molecular Weight (calculated)
19747.2 Da
IEP (calculated)
8.617
GRAVY (calculated)
-0.543
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDNFSMAPT EGNHGKAKQL VVKSEAQNNK ERSYIGVRKR PWGKFAAEIR DTTRNGARVW LGTFDSIEAA ALAYDQAAFT MRGDHAVLNF PVKTVKKSLQ
101: EIQYSCCNGS SPALALKERH CIQRKLSSKA KMCRGKETSS SEDSTQSVVV FEDLGVDYLE HLLSVSDQSE STSPSYFN
101: EIQYSCCNGS SPALALKERH CIQRKLSSKA KMCRGKETSS SEDSTQSVVV FEDLGVDYLE HLLSVSDQSE STSPSYFN
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.