CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31709	Soybean	nucleus	49.75	58.68
VIT_14s0081g00730.t01	Wine grape	nucleus	58.38	55.29
KRH69130	Soybean	nucleus	53.81	52.22
PGSC0003DMT400095521	Potato	nucleus	52.28	52.02
Solyc11g006050.1.1	Tomato	nucleus	51.78	51.26
KRG92311	Soybean	nucleus	52.79	48.6
KRH32176	Soybean	nucleus	41.62	47.4
KRH34483	Soybean	nucleus	52.28	47.03
KRG95655	Soybean	nucleus	49.24	46.41
KRH19551	Soybean	nucleus	40.1	44.38
KRH19550	Soybean	nucleus	44.67	43.78
KRH67371	Soybean	nucleus	50.76	41.32
KRH19549	Soybean	nucleus	44.16	39.55
KRG95657	Soybean	nucleus	50.76	39.53
KRH19548	Soybean	nucleus	42.64	39.44
KRH19553	Soybean	nucleus	51.78	39.38
KRH32180	Soybean	nucleus	51.78	37.78
KRG95654	Soybean	nucleus	34.01	35.45
KRH67369	Soybean	nucleus	39.59	33.77
KRH21337	Soybean	nucleus	38.07	28.3
KRH10963	Soybean	nucleus	38.07	28.2

Protein Annotations

EntrezGene:100787732	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02012174	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_19G248900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7N071	EnsemblPlants:KRG97053	ProteinID:KRG97053	ProteinID:KRG97053.1
ProteinID:KRG97054.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF35
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000233EB90	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:-:49504244..49505663

Molecular Weight (calculated)

22053.9 Da

IEP (calculated)

6.396

GRAVY (calculated)

-0.485

Length

197 amino acids

Sequence
(BLAST)

001: MSSSNFESPY EYSCSSSSSR HNQYSLPFNH NDSQEMLLYQ VLTQAGATSS VSHGSGSVVE AEVSVSYRGV RRRPWGKFAA EIRDSTRNGV RVWLGTFDTA
101: EAAALAYDQA ALVMRGSMAV LNFPAEIVRQ SLRNMEQYGS FQEGSSPVLE LKKRHSMKRK SETKKHQLHD VMVLEDLGAE YLEHLLTLSQ DMDMDAC

Best Arabidopsis Sequence Match ( AT2G31230.1 )
(BLAST)

001: MEYSQSSMYS SPSSWSSSQE SLLWNESCFL DQSSEPQAFF CPNYDYSDDF FSFESPEMMI KEEIQNGDVS NSEEEEKVGI DEERSYRGVR KRPWGKFAAE
101: IRDSTRNGIR VWLGTFDKAE EAALAYDQAA FATKGSLATL NFPVEVVRES LKKMENVNLH DGGSPVMALK RKHSLRNRPR GKKRSSSSSS SSSNSSSCSS
201: SSSTSSTSRS SSKQSVVKQE SGTLVVFEDL GAEYLEQLLM SSC

Arabidopsis Description

ERF15Ethylene-responsive transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYM0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.