CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31709	Soybean	nucleus	65.02	79.04
KRG92311	Soybean	nucleus	59.61	56.54
KRH34483	Soybean	nucleus	58.13	53.88
KRG97053	Soybean	nucleus	52.22	53.81
Bra023745.1-P	Field mustard	nucleus	55.17	53.33
Bra023746.1-P	Field mustard	nucleus	55.17	53.33
CDY35518	Canola	nucleus	55.17	53.33
KRH32176	Soybean	nucleus	43.84	51.45
AT3G23240.1	Thale cress	nucleus	54.19	50.46
KRH19551	Soybean	nucleus	43.84	50.0
Solyc09g089930.1.1	Tomato	nucleus	58.62	49.58
PGSC0003DMT400044379	Potato	nucleus	58.13	48.96
PGSC0003DMT400036837	Potato	nucleus	46.31	45.85
KRH19550	Soybean	nucleus	45.32	45.77
Solyc03g005520.1.1	Tomato	nucleus	47.29	45.5
KRG95655	Soybean	nucleus	45.81	44.5
PGSC0003DMT400034873	Potato	nucleus	47.78	43.89
KRH19548	Soybean	nucleus	44.83	42.72
KRH19549	Soybean	nucleus	45.32	41.82
KRH67371	Soybean	nucleus	48.28	40.5
KRH19553	Soybean	nucleus	50.74	39.77
KRG95657	Soybean	nucleus	48.77	39.13
KRH32180	Soybean	nucleus	51.72	38.89
KRH67369	Soybean	nucleus	41.38	36.36
KRG95654	Soybean	nucleus	32.51	34.92
KRH21337	Soybean	nucleus	35.47	27.17
KRH10963	Soybean	nucleus	35.47	27.07

Protein Annotations

EntrezGene:100780576	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02000689	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ncoils:Coil	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_02G006200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	UniProt:I1JB91	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH69130	ProteinID:KRH69130
ProteinID:KRH69130.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF67
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0001B36E79	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:669867..671087

Molecular Weight (calculated)

22854.9 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.566

Length

203 amino acids

Sequence
(BLAST)

001: MDCSSVLHSS NSSFFPFNEN DPEEMLLYGM ITSYQEKVII KEEEVNSEEN NNKNKKNNNK SSFRGVRSRP WGKFAAEIRD STRHGVRVWL GTFDSAEAAA
101: LAYDQAAFSM RGSAAVLNFP VEKVKESLRD MNCTLSQLDG SSPVVALKRR HSLGRKMAAK KKKVEETHGD VRLENVVVLE DLGAEYLEHL LMMSSHDTTS
201: CSW

Best Arabidopsis Sequence Match ( AT3G23240.1 )
(BLAST)

001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW

Arabidopsis Description

ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.