Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023745.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY35518 | Canola | nucleus | 99.52 | 99.52 |
| AT3G23240.1 | Thale cress | nucleus | 88.1 | 84.86 |
| KRH31709 | Soybean | nucleus | 47.62 | 59.88 |
| KRG92311 | Soybean | nucleus | 60.0 | 58.88 |
| KRH34483 | Soybean | nucleus | 60.95 | 58.45 |
| Solyc09g066360.1.1 | Tomato | nucleus | 52.38 | 56.99 |
| PGSC0003DMT400026627 | Potato | nucleus | 52.86 | 56.35 |
| KRH69130 | Soybean | nucleus | 53.33 | 55.17 |
| PGSC0003DMT400035406 | Potato | nucleus | 43.33 | 52.3 |
| Bra022832.1-P | Field mustard | nucleus | 49.52 | 44.64 |
| Bra018271.1-P | Field mustard | nucleus | 47.62 | 41.67 |
| Bra032433.1-P | Field mustard | nucleus | 45.24 | 41.67 |
| Bra015478.1-P | Field mustard | nucleus | 45.24 | 40.25 |
| Bra021712.1-P | Field mustard | nucleus | 49.52 | 39.25 |
| Bra013310.1-P | Field mustard | nucleus | 34.76 | 24.01 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra023746 | EnsemblPlants:Bra023746.1 |
| EnsemblPlants:Bra023746.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4E4P2 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF15 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002543F5F | SEG:seg |
Description
AT3G23240 (E=8e-076) ERF1, ATERF1 | ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor
Coordinates
chrA01:-:19554434..19555066
Molecular Weight (calculated)
23869.5 Da
IEP (calculated)
4.702
GRAVY (calculated)
-0.740
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPYFVQSPF SAFSPEYSPE SFSSSSSNNY SLPFNENDSE EMLLYGLIEQ STQQNVPVKT EEETGTSRKP EKSYRGVRRR PWGKFAAEIR DSTRNGIRVW
101: LGTFESAEEA ALAYDQAAFS MRGSSAILNF PAERVKESLS EIMYSYEDGC SPVVALKRKH SMRRRMTNRK TKDTDFDHSS VKLDNVVVFE DLGEQYLEEL
201: LGSSENSGAW
101: LGTFESAEEA ALAYDQAAFS MRGSSAILNF PAERVKESLS EIMYSYEDGC SPVVALKRKH SMRRRMTNRK TKDTDFDHSS VKLDNVVVFE DLGEQYLEEL
201: LGSSENSGAW
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.