CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32180	Soybean	nucleus	94.21	90.37
KRH67371	Soybean	nucleus	56.76	60.74
KRG95657	Soybean	nucleus	59.07	60.47
KRH31709	Soybean	nucleus	35.52	55.09
KRG97053	Soybean	nucleus	39.38	51.78
KRH32176	Soybean	nucleus	34.36	51.45
KRH69130	Soybean	nucleus	39.77	50.74
KRG92311	Soybean	nucleus	40.54	49.07
KRH34483	Soybean	nucleus	39.0	46.12
KRH19551	Soybean	nucleus	30.89	44.94
KRH19550	Soybean	nucleus	33.98	43.78
KRH67369	Soybean	nucleus	37.84	42.42
KRG95655	Soybean	nucleus	33.98	42.11
KRG95654	Soybean	nucleus	30.12	41.27
KRH19549	Soybean	nucleus	34.36	40.45
KRH19548	Soybean	nucleus	33.2	40.38
KRH10963	Soybean	nucleus	27.8	27.07
KRH21337	Soybean	nucleus	27.41	26.79

Protein Annotations

EntrezGene:100784784	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02008186	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
EMBL:BT095625	UniProt:C6TDG7	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_13G123100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH19553	ProteinID:KRH19553
ProteinID:KRH19553.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF35
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0001B15B51	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:+:23636382..23637784

Molecular Weight (calculated)

29042.5 Da

IEP (calculated)

5.974

GRAVY (calculated)

-0.679

Length

259 amino acids

Sequence
(BLAST)

001: MDFDSSFFQY QNFNSSFVNS SVCAEPFSWE NFLFFNEENT TTTTLNSFTI TDHSSQSRIK ESSSSDYSNS SGSLVSTESQ LEVSSNLTHA SHQLETHASP
101: QPPKEGNKDK RPFRGVRRRP WGKFAAEIRD STRNGVRVWI GTFDTAEAAA LAYDQAALST RGSMAVLNFP EEVVRESLKD MQNNNKPSLE DGSSPVLALK
201: RKHTMRRKSK ATNKKTKRGH GMELENIVLS QNVLVLEDLG SEYLEQLLSL TSSDDDFLC

Best Arabidopsis Sequence Match ( AT2G31230.1 )
(BLAST)

001: MEYSQSSMYS SPSSWSSSQE SLLWNESCFL DQSSEPQAFF CPNYDYSDDF FSFESPEMMI KEEIQNGDVS NSEEEEKVGI DEERSYRGVR KRPWGKFAAE
101: IRDSTRNGIR VWLGTFDKAE EAALAYDQAA FATKGSLATL NFPVEVVRES LKKMENVNLH DGGSPVMALK RKHSLRNRPR GKKRSSSSSS SSSNSSSCSS
201: SSSTSSTSRS SSKQSVVKQE SGTLVVFEDL GAEYLEQLLM SSC

Arabidopsis Description

ERF15Ethylene-responsive transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYM0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.